Profile-profile-based Multiple Sequence Alignment
- URL
- From file (Fasta, Clustal, GFF, Jalview features, Newick)
- Drag & Drop
- ID ↑
- ID ↓
- Label ↑
- Label ↓
- Seq ↑
- Seq ↓
- Identity ↑
- Identity ↓
- Gaps ↑
- Gaps ↓
- Consensus to top
- Hide columns by threshold
- Hide columns by selection
- Hide columns by gaps
- Hide seqs by identity
- Hide seqs by selection
- Hide seqs by gaps
- Reset
- Find Motif (supports RegEx)
- Invert columns
- Invert rows
- Reset
- Hide residues indices
- Hide ID/Label
- Show meta info (Gaps/Ident)
- Hide overview panel
- Show sequence logo
- Show gap weights
- Show conservation weights
- Show scale slider
- Hide Label
- Hide ID
- Hide gaps %
- Hide identity score
- Reset
- Taylor
- Buried
- Cinema
- Clustal
- Clustal2
- Helix
- Hydrophobicity
- Lesk
- MAE
- Nucleotide
- Purine
- PID
- Strand
- Turn
- Zappo
- No color
- Add consensus seq
- Jump to a column
- Share view (URL)↪
- View in Jalview
- Export alignment (FASTA)
- Export alignment (URL)
- Export selected sequences (FASTA)
- Export features (GFF)
- Export MSA image (PNG)
- About the project
- Report issues
- User manual