# STOCKHOLM 1.0 #=GF ID DUF1904 #=GF AC PF08921.13 #=GF DE Domain of unknown function (DUF1904) #=GF AU Mistry J;0000-0003-2479-5322 #=GF AU Sammut SJ;0000-0003-4472-904X #=GF SE pdb_1u9d #=GF GA 24.10 24.10; #=GF TC 24.80 24.60; #=GF NC 23.90 23.30; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF WK Domain_of_unknown_function #=GF CL CL0082 #=GF DR INTERPRO; IPR015017; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC This domain is found in a set of hypothetical bacterial #=GF CC proteins. #=GF SQ 9 #=GS Q8RFG4_FUSNN/1-107 AC Q8RFG4.1 #=GS Q188J0_CLOD6/1-108 AC Q188J0.1 #=GS A4J4K9_DESRM/1-107 AC A4J4K9.1 #=GS Q6MPG9_BDEBA/5-112 AC Q6MPG9.1 #=GS Q6F289_MESFL/1-104 AC Q6F289.1 #=GS Q39YS1_GEOMG/1-102 AC Q39YS1.1 #=GS Q8EEJ0_SHEON/1-109 AC Q8EEJ0.1 #=GS A1S6E5_SHEAM/1-107 AC A1S6E5.1 #=GS Q9KU16_VIBCH/1-106 AC Q9KU16.1 #=GS Q9KU16_VIBCH/1-106 DR PDB; 1U9D B; 1-106; #=GS Q9KU16_VIBCH/1-106 DR PDB; 1U9D A; 1-106; Q8RFG4_FUSNN/1-107 MPHLKIRGIEKNLIVENSKEIIDELTKIIGCDRNWFTIEHQNTKYIFDGKIVDGYTFVELYWFARDEKIKKEVADFLTKFIKKI.NNNKDCCIIFFTLTGDNYCDNGE. Q188J0_CLOD6/1-108 MPQIKIRGINENDICKISEKMINDLVEAVKCPRDYFEIECIKSVAIRDGKIADVYPFVEVAWFDRGQEVQDIVARIITDSIRNN.LDVESMDLAFTVFEKEKYYENGEH A4J4K9_DESRM/1-107 MPQIIIRGIEPKKIMPISNDLISNLEKIIGCPREDLTLECIPSIFVKDGSIDAGYPFVEIGWFDRGQSVQDLVAKEITNQIQR..AGFESVDIMFTTFTKNKYYENGQH Q6MPG9_BDEBA/5-112 MPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYPFIEVLWFARSQEVQDECASIITRQIKSI.ADYEDVVIVFQVLAKEAYYENGIH Q6F289_MESFL/1-104 MPILKFNGTTEEKVKEYSKK.INEIADLIVSKPEAILMMVNNNNIFVAKNTNKRI.YVEVDWLKRSEESRVLLVQHLTNFFG...NQGVNVSVKFTEINNDLYVNNEKR Q39YS1_GEOMG/1-102 MPYLRFKGFDEGFLRKLGPLVVEEFSRVAVVPPEVVKIELLNIVQITATPRS.....LEIFIFPRDQKKHDAIAATLAGILGR..YGYDDVHIFFVLLSPSLYYKEGIP Q8EEJ0_SHEON/1-109 MPHISMRGLPQAVVAELSQTLLQSLAAICKGKAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLAVTEAYPELTQIAVMFLSLTPSASYRGGQH A1S6E5_SHEAM/1-107 MPHLRIRGLASDAVARLSRELPARLAAITATEVSSYTMEWIPSQFFQQGEACQPLVMVEVLWFQRNESTQDDMEACIREHLLA..ETQLSVAVIFIGLDKRGYYRDGRH Q9KU16_VIBCH/1-106 MPHLRFRAVEAHIVESLVPTLLNELSSLLSTARNAFTFELINTQYFAEGGV...YPMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLAVVFIPLQRTAYYLDGQH #=GR Q9KU16_VIBCH/1-106 SS --EEEEESS-HHHHHHHHHHHHHHHHHHHT--GGG-EEEE-------TT-B...--EEEEEES---HHHHHHHHHHHHHHHHHHH-TT---EEEEEE--GGG-EETTEE #=GC SS_cons --EEEEESS-HHHHHHHHHHHHHHHHHHHT--GGG-EEEE-------TT-B...--EEEEEES---HHHHHHHHHHHHHHHHHHH-TT---EEEEEE--GGG-EETTEE #=GC seq_cons MPal+hRGlppphltclSpplls-Luplhsssh-saThEhlso.hhpsGphsp.ashVElhWFsRspcspDtlAphITptlpp..sshpslslhFhsLspstYYcsGpH //