PDB release date | 2025-02-05 |
Number of PDB entries | 204741 |
Number of biological assemblies | 304608 |
Number of proteins | 816324 |
Number of peptides | 23009 |
Number of nucleic acids | 20691 |
Number of SCOPe domains | 188370 |
|
|
Number of protein-protein interaction interfaces | 841283 |
Clusters at sequence similarity > 95% | 87098 |
Clusters at sequence similarity > 95% and interface residue contacts similarity > 50% | 143529 |
Clusters at sequence similarity > 40% | 53928 |
Clusters at sequence similarity > 40% and interface residue contacts similarity > 50% | 115061 |
Clusters at sequence similarity > 40% and interface area similarity > 50% | 86145 |
|
|
Number of domain-domain interaction interfaces | 198386 |
Clusters at sequence similarity > 95% | 22495 |
Clusters at sequence similarity > 95% and interface residue contacts similarity > 50% | 36486 |
Clusters at sequence similarity > 40% | 13653 |
Clusters at sequence similarity > 40% and interface residue contacts similarity > 50% | 27386 |
Clusters at sequence similarity > 40% and interface area similarity > 50% | 23053 |
|
|
Number of all binding sites | 2081107 |
Clusters at sequence similarity > 95% | 70146 |
Clusters at sequence similarity > 95% and residue interface areas similarity > 50% | 252232 |
Clusters at sequence similarity > 40% | 38389 |
Clusters at sequence similarity > 40% and residue interface areas similarity > 50% | 183287 |
Clusters at sequence similarity > 40% and binding site area similarity > 50% | 147358 |
|
|
Number of protein-protein binding sites | 1682566 |
Clusters at sequence similarity > 95% | 59456 |
Clusters at sequence similarity > 95% and residue interface areas similarity > 50% | 206146 |
Clusters at sequence similarity > 40% | 32850 |
Clusters at sequence similarity > 40% and residue interface areas similarity > 50% | 152018 |
Clusters at sequence similarity > 40% and binding site area similarity > 50% | 122038 |
|
|
Number of protein-peptide binding sites | 29503 |
Clusters at sequence similarity > 95% | 4405 |
Clusters at sequence similarity > 95% and residue interface areas similarity > 50% | 6152 |
Clusters at sequence similarity > 40% | 2581 |
Clusters at sequence similarity > 40% and residue interface areas similarity > 50% | 4789 |
Clusters at sequence similarity > 40% and binding site area similarity > 50% | 3922 |
|
|
Number of protein-nucleic acid binding sites | 154458 |
Clusters at sequence similarity > 95% | 8808 |
Clusters at sequence similarity > 95% and residue interface areas similarity > 50% | 14314 |
Clusters at sequence similarity > 40% | 5061 |
Clusters at sequence similarity > 40% and residue interface areas similarity > 50% | 10206 |
Clusters at sequence similarity > 40% and binding site area similarity > 50% | 8011 |
|
|
Number of domain-domain binding sites | 396642 |
Clusters at sequence similarity > 95% | 18911 |
Clusters at sequence similarity > 95% and residue interface areas similarity > 50% | 51888 |
Clusters at sequence similarity > 40% | 10738 |
Clusters at sequence similarity > 40% and residue interface areas similarity > 50% | 36292 |
Clusters at sequence similarity > 40% and binding site area similarity > 50% | 31486 |