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Clustered protein binding sites

Protein: homologs of sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2

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Link to details	Structure title	PDB ID	Resolution, Å	Result protein	Protein ID	Source organism	Expect value	Protein sequence length	Alignment coverage	SCOP family	Interacts with	Interactor ID	Interactor source organism	Interactor sequence length	From SCOP family	Interface type	Buried surface area, Å²	No. of contacts	No. of members in cluster
1 Details	Human DNA Ligase III Recognizes DNA Ends by Dynamic Switching Between Two DNA Bound States	3l2p	3.0	DNA ligase 3	3l2p_A	Homo sapiens	0	579	57%		Nucleic acid	3l2p_D_B_C		44		nucleic acid	2254.61	175	1
2 Details	Human DNA Ligase 1 (E592R) Bound to an Adenylated, hydroxyl terminated DNA nick	6q1v	1.9	DNA ligase 1	6q1v_A	Homo sapiens	3.90e-48	645	35%		DNA	6q1v_D_B_C	synthetic construct	38		nucleic acid	2431.32	200	8
3 Details	Human LigIV catalytic domain with bound DNA-adenylate intermediate in closed conformation	6bkg	2.4	DNA ligase 4	6bkg_A	Homo sapiens	4.38e-38	621	52%		DNA	6bkg_T_P_D	synthetic construct	39		nucleic acid	2243.01	179	1
4 Details	Lysyl-adenylate form of human LigIV catalytic domain with bound DNA substrate in open conformation	6bkf	3.2	DNA ligase 4	6bkf_A	Homo sapiens	4.38e-38	621	52%		DNA	6bkf_T_P_D	synthetic construct	38		nucleic acid	757.82	55	1
5 Details	Structure of Human PARP-1 bound to a DNA double strand break	4dqy	3.2	Poly [ADP-ribose] polymerase 1	4dqy_D	Homo sapiens	3.15e-6	116	9%		DNA (26-MER)	4dqy_M_N		53		nucleic acid	445.81	29	18
6 Details	Crystal structure of the human PARP-1 DNA binding domain in complex with DNA	4av1	3.1	POLY [ADP-RIBOSE] POLYMERASE 1	4av1_B	Homo sapiens	7.89e-5	223	10%		Nucleic acid	4av1_X_Y	synthetic construct	25		nucleic acid	551.01	34	2
7 Details	Crystal structure of the human PARP-1 DNA binding domain in complex with DNA	4av1	3.1	POLY [ADP-RIBOSE] POLYMERASE 1	4av1_C	Homo sapiens	7.89e-5	223	10%		Nucleic acid	4av1_X_Y	synthetic construct	25		nucleic acid	327.17	24	2
8 Details	Structure of Human PARP-1 bound to a DNA double strand break in complex with (2Z)-2-{4-[2-(morpholin-4-yl)ethoxy]benzylidene}-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide	4oqb	3.4	Poly [ADP-ribose] polymerase 1	4oqb_A	Homo sapiens	1.38e-4	267	8%		DNA (26-MER)	4oqb_M_N		53		nucleic acid	592.05	43	6
9 Details	Human PARP-1 zinc finger 2 (Zn2) bound to DNA	3odc	2.8	Poly [ADP-ribose] polymerase 1	3odc_A	Homo sapiens	2.03e-4	111	10%		Nucleic acid	3odc_C_D		17		nucleic acid	496.22	31	4

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