{"comer_search": { "program": "comer", "version": "2.03.03", "references": [ "Margelevicius, M. (2020). COMER2: GPU-accelerated sensitive and specific homology searches. Bioinformatics 36, 3570-3572.", "Margelevicius, M. (2016). Bayesian nonparametrics in protein remote homology search. Bioinformatics 32, 2744-2752." ], "query": { "length": 84, "name": "", "description": "PF11325.10 (sequence)" }, "database": { "names": [ "swissprot90_2022_03", "pdb70_220717" ], "number_of_profiles": 390907, "number_of_positions": 143238575 }, "message": "Profiles found below the e-value threshold:", "search_summary": [ {"summary_entry": { "description": "sp|Q8DXI7|SSB4_STRA5 Single-stranded DNA-binding protein 4 OS=Streptococ...", "score": 48, "evalue": 1.1e-06 }}, {"summary_entry": { "description": "sp|Q8E0Z9|SSB3_STRA5 Single-stranded DNA-binding protein 3 OS=Streptococ...", "score": 47, "evalue": 2.4e-06 }}, {"summary_entry": { "description": "sp|P60471|SSB_ONYPE Single-stranded DNA-binding protein OS=Onion yellows...", "score": 45, "evalue": 1e-05 }}, {"summary_entry": { "description": "sp|Q8E220|SSB2_STRA5 Single-stranded DNA-binding protein 2 OS=Streptococ...", "score": 44, "evalue": 1.2e-05 }}, {"summary_entry": { "description": "sp|Q5HJ26|SSB2_STAAC Single-stranded DNA-binding protein 2 OS=Staphyloco...", "score": 45, "evalue": 1.3e-05 }}, {"summary_entry": { "description": "sp|P73145|SSB2_SYNY3 Thylakoid-associated single-stranded DNA-binding pr...", "score": 45, "evalue": 1.3e-05 }}, {"summary_entry": { "description": "sp|Q8R6M2|SSB_CALS4 Single-stranded DNA-binding protein OS=Caldanaerobac...", "score": 45, "evalue": 1.5e-05 }}, {"summary_entry": { "description": "sp|Q899R2|SSB_CLOTE Single-stranded DNA-binding protein OS=Clostridium t...", "score": 46, "evalue": 1.6e-05 }}, {"summary_entry": { "description": "sp|Q97CX3|SSB3_CLOAB Single-stranded DNA-binding protein 3 OS=Clostridiu...", "score": 44, "evalue": 1.9e-05 }}, {"summary_entry": { "description": "sp|P66854|SSB_STRPN Single-stranded DNA-binding protein OS=Streptococcus...", "score": 43, "evalue": 2.4e-05 }}, {"summary_entry": { "description": "sp|P66848|SSB_NEIMA Single-stranded DNA-binding protein OS=Neisseria men...", "score": 44, "evalue": 2.8e-05 }}, {"summary_entry": { "description": "sp|Q8A7M7|SSB_BACTN Single-stranded DNA-binding protein OS=Bacteroides t...", "score": 43, "evalue": 2.8e-05 }}, {"summary_entry": { "description": "sp|Q8PIJ2|SSB_XANAC Single-stranded DNA-binding protein OS=Xanthomonas a...", "score": 44, "evalue": 3.1e-05 }}, {"summary_entry": { "description": "sp|O84048|SSB_CHLTR Single-stranded DNA-binding protein OS=Chlamydia tra...", "score": 44, "evalue": 3.2e-05 }}, {"summary_entry": { "description": "sp|Q9XJG4|SSB_BPP1 Single-stranded DNA-binding protein OS=Escherichia ph...", "score": 44, "evalue": 3.4e-05 }}, {"summary_entry": { "description": "sp|Q8ZSD2|SSB2_NOSS1 Single-stranded DNA-binding protein 2 OS=Nostoc sp....", "score": 42, "evalue": 3.8e-05 }}, {"summary_entry": { "description": "sp|O51141|SSB_BORBU Single-stranded DNA-binding protein OS=Borrelia burg...", "score": 43, "evalue": 4e-05 }}, {"summary_entry": { "description": "sp|Q8P2H3|SSB1_STRP8 Single-stranded DNA-binding protein 1 OS=Streptococ...", "score": 43, "evalue": 4e-05 }}, {"summary_entry": { "description": "sp|Q83EP4|SSB_COXBU Single-stranded DNA-binding protein OS=Coxiella burn...", "score": 44, "evalue": 4.2e-05 }}, {"summary_entry": { "description": "sp|Q87DQ5|SSB_XYLFT Single-stranded DNA-binding protein OS=Xylella fasti...", "score": 44, "evalue": 4.3e-05 }}, {"summary_entry": { "description": "sp|P66846|SSB_BORPE Single-stranded DNA-binding protein OS=Bordetella pe...", "score": 44, "evalue": 4.9e-05 }}, {"summary_entry": { "description": "3PGZ_A Single-stranded DNA-binding protein; SSGCID, BARTONELLA HENSELAE,...", "score": 44, "evalue": 5e-05 }}, {"summary_entry": { "description": "sp|Q9PHE7|SSB1_XYLFA Single-stranded DNA-binding protein 1 OS=Xylella fa...", "score": 43, "evalue": 5.1e-05 }}, {"summary_entry": { "description": "sp|Q5XE77|SSB1_STRP6 Single-stranded DNA-binding protein 1 OS=Streptococ...", "score": 43, "evalue": 5.6e-05 }}, {"summary_entry": { "description": "sp|Q97HT8|SSB2_CLOAB Single-stranded DNA-binding protein 2 OS=Clostridiu...", "score": 44, "evalue": 5.7e-05 }}, {"summary_entry": { "description": "sp|P59933|SSB_WOLSU Single-stranded DNA-binding protein OS=Wolinella suc...", "score": 43, "evalue": 6.9e-05 }}, {"summary_entry": { "description": "4MZ9_C Single-stranded DNA-binding protein; Single strand DNA-binding do...", "score": 43, "evalue": 7.1e-05 }}, {"summary_entry": { "description": "3TQY_B Single-stranded DNA-binding protein; DNA replication, TRANSFERASE...", "score": 42, "evalue": 7.3e-05 }}, {"summary_entry": { "description": "sp|Q932A8|SSB2_STAAM Single-stranded DNA-binding protein 2 OS=Staphyloco...", "score": 41, "evalue": 7.9e-05 }}, {"summary_entry": { "description": "5ODP_A Single-stranded DNA-binding protein; Single-Strand Binding protei...", "score": 44, "evalue": 8.2e-05 }}, {"summary_entry": { "description": "sp|P77953|SSB_SHEHA Single-stranded DNA-binding protein OS=Shewanella ha...", "score": 41, "evalue": 8.8e-05 }}, {"summary_entry": { "description": "sp|Q8D254|SSB_WIGBR Single-stranded DNA-binding protein OS=Wigglesworthi...", "score": 43, "evalue": 9.3e-05 }}, {"summary_entry": { "description": "6IRQ_B Single-stranded DNA-binding protein; single-strand DNA binding pr...", "score": 41, "evalue": 9.4e-05 }}, {"summary_entry": { "description": "sp|Q823K0|SSB_CHLCV Single-stranded DNA-binding protein OS=Chlamydophila...", "score": 43, "evalue": 0.00011 }}, {"summary_entry": { "description": "sp|P40947|SSB_PSEAE Single-stranded DNA-binding protein OS=Pseudomonas a...", "score": 43, "evalue": 0.00012 }}, {"summary_entry": { "description": "6BHW_D Single-stranded DNA-binding protein A; Single-stranded DNA bindin...", "score": 41, "evalue": 0.00012 }}, {"summary_entry": { "description": "sp|Q82S98|SSB_NITEU Single-stranded DNA-binding protein OS=Nitrosomonas ...", "score": 43, "evalue": 0.00012 }}, {"summary_entry": { "description": "sp|Q9CJP4|SSB_PASMU Single-stranded DNA-binding protein OS=Pasteurella m...", "score": 43, "evalue": 0.00013 }}, {"summary_entry": { "description": "sp|A1RNI8|PRIB_SHESW Primosomal replication protein N OS=Shewanella sp. ...", "score": 40, "evalue": 0.00017 }}, {"summary_entry": { "description": "sp|P59930|SSB_HAEDU Single-stranded DNA-binding protein OS=Haemophilus d...", "score": 42, "evalue": 0.00018 }}, {"summary_entry": { "description": "sp|Q9KH06|SSB_THEAQ Single-stranded DNA-binding protein OS=Thermus aquat...", "score": 46, "evalue": 0.00018 }}, {"summary_entry": { "description": "sp|C0SPB6|SSBB_BACSU Single-stranded DNA-binding protein B OS=Bacillus s...", "score": 39, "evalue": 0.00018 }}, {"summary_entry": { "description": "sp|P28046|SSB_PROMI Single-stranded DNA-binding protein OS=Proteus mirab...", "score": 42, "evalue": 0.0002 }}, {"summary_entry": { "description": "sp|Q8K933|SSB_BUCAP Single-stranded DNA-binding protein OS=Buchnera aphi...", "score": 43, "evalue": 0.0002 }}, {"summary_entry": { "description": "sp|Q8KAM2|SSB2_CHLTE Single-stranded DNA-binding protein 2 OS=Chlorobacu...", "score": 42, "evalue": 0.00021 }}, {"summary_entry": { "description": "sp|O85824|SSB_THETH Single-stranded DNA-binding protein OS=Thermus therm...", "score": 45, "evalue": 0.00021 }}, {"summary_entry": { "description": "sp|O66475|SSB_AQUAE Single-stranded DNA-binding protein OS=Aquifex aeoli...", "score": 41, "evalue": 0.00024 }}, {"summary_entry": { "description": "sp|Q8RE26|SSB_FUSNN Single-stranded DNA-binding protein OS=Fusobacterium...", "score": 41, "evalue": 0.00025 }}, {"summary_entry": { "description": "sp|Q8XH44|SSB_CLOPE Single-stranded DNA-binding protein OS=Clostridium p...", "score": 42, "evalue": 0.00026 }}, {"summary_entry": { "description": "sp|P28044|SSB7_ECOLX Plasmid-derived single-stranded DNA-binding protein...", "score": 42, "evalue": 0.00027 }}, {"summary_entry": { "description": "sp|P25762|SSB_SERMA Single-stranded DNA-binding protein OS=Serratia marc...", "score": 41, "evalue": 0.00027 }}, {"summary_entry": { "description": "sp|Q72UU3|SSB_LEPIC Single-stranded DNA-binding protein OS=Leptospira in...", "score": 41, "evalue": 0.00027 }}, {"summary_entry": { "description": "sp|Q9CGS5|SSB1_LACLA Single-stranded DNA-binding protein 1 OS=Lactococcu...", "score": 41, "evalue": 0.00028 }}, {"summary_entry": { "description": "sp|Q8DIU1|SSB_THEVB Single-stranded DNA-binding protein OS=Thermosynecho...", "score": 40, "evalue": 0.00029 }}, {"summary_entry": { "description": "1SE8_A Single-strand binding protein; Single-strand binding protein, DNA...", "score": 45, "evalue": 0.00029 }}, {"summary_entry": { "description": "3K7U_C MP18 RNA editing complex protein; RNA-editing, OB-fold, RNA-editi...", "score": 40, "evalue": 0.00031 }}, {"summary_entry": { "description": "sp|Q97KH4|SSB1_CLOAB Single-stranded DNA-binding protein 1 OS=Clostridiu...", "score": 40, "evalue": 0.00033 }}, {"summary_entry": { "description": "2FXQ_A Single-strand binding protein; 5 strand beta-sheet extended loops...", "score": 44, "evalue": 0.00034 }}, {"summary_entry": { "description": "1Z9F_A Single-strand binding protein; TM0604, single stranded DNA-bindin...", "score": 40, "evalue": 0.00038 }}, {"summary_entry": { "description": "sp|P09381|SSBPB_XENLA Single-stranded DNA-binding protein 1-B, mitochond...", "score": 39, "evalue": 0.00038 }}, {"summary_entry": { "description": "sp|P44409|SSB_HAEIN Single-stranded DNA-binding protein OS=Haemophilus i...", "score": 41, "evalue": 0.0004 }}, {"summary_entry": { "description": "4GS3_A Single-stranded DNA-binding protein; primosome, oligonucleotide\/...", "score": 38, "evalue": 0.00042 }}, {"summary_entry": { "description": "sp|Q839Y9|SSB_ENTFA Single-stranded DNA-binding protein OS=Enterococcus ...", "score": 41, "evalue": 0.00046 }}, {"summary_entry": { "description": "sp|A1AJA6|PRIB_ECOK1 Primosomal replication protein N OS=Escherichia col...", "score": 40, "evalue": 0.00047 }}, {"summary_entry": { "description": "sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein OS=Deinococcus r...", "score": 44, "evalue": 0.00047 }}, {"summary_entry": { "description": "sp|Q4UJW3|SSB_RICFE Single-stranded DNA-binding protein OS=Rickettsia fe...", "score": 40, "evalue": 0.00049 }}, {"summary_entry": { "description": "sp|A8FR96|PRIB_SHESH Primosomal replication protein N OS=Shewanella sedi...", "score": 38, "evalue": 0.00052 }}, {"summary_entry": { "description": "sp|P59932|SSB_RHOBA Single-stranded DNA-binding protein OS=Rhodopirellul...", "score": 41, "evalue": 0.00056 }}, {"summary_entry": { "description": "sp|P51237|YCF41_PORPU Putative single-stranded DNA-binding protein ycf41...", "score": 39, "evalue": 0.00066 }}, {"summary_entry": { "description": "sp|P0AGE0|SSB_ECOLI Single-stranded DNA-binding protein OS=Escherichia c...", "score": 40, "evalue": 0.00067 }}, {"summary_entry": { "description": "3A5U_A Single-stranded DNA-binding protein; DNA binding protein, DNA dam...", "score": 39, "evalue": 0.00068 }}, {"summary_entry": { "description": "sp|Q9WZ73|SSB_THEMA Single-stranded DNA-binding protein OS=Thermotoga ma...", "score": 39, "evalue": 0.00071 }}, {"summary_entry": { "description": "sp|Q89A53|SSB_BUCBP Single-stranded DNA-binding protein OS=Buchnera aphi...", "score": 41, "evalue": 0.00075 }}, {"summary_entry": { "description": "sp|Q6G7V6|SSB1_STAAS Single-stranded DNA-binding protein 1 OS=Staphyloco...", "score": 40, "evalue": 0.00076 }}, {"summary_entry": { "description": "sp|P59927|SSB_CUPNH Single-stranded DNA-binding protein OS=Cupriavidus n...", "score": 40, "evalue": 0.00078 }}, {"summary_entry": { "description": "sp|Q9Z8F7|SSB_CHLPN Single-stranded DNA-binding protein OS=Chlamydia pne...", "score": 40, "evalue": 0.00081 }}, {"summary_entry": { "description": "sp|P57610|SSB_BUCAI Single-stranded DNA-binding protein OS=Buchnera aphi...", "score": 40, "evalue": 0.00083 }}, {"summary_entry": { "description": "sp|A8H8L1|PRIB_SHEPA Primosomal replication protein N OS=Shewanella peal...", "score": 39, "evalue": 0.00085 }}, {"summary_entry": { "description": "sp|Q847G1|SSB1_PSEPU Single-stranded DNA-binding protein OS=Pseudomonas ...", "score": 40, "evalue": 0.00086 }}, {"summary_entry": { "description": "sp|Q8ZJ06|SSB_YERPE Single-stranded DNA-binding protein OS=Yersinia pest...", "score": 40, "evalue": 0.00086 }}, {"summary_entry": { "description": "sp|Q7MYU8|PRIB_PHOLL Primosomal replication protein N OS=Photorhabdus la...", "score": 38, "evalue": 0.00089 }}, {"summary_entry": { "description": "sp|Q8EA81|SSB_SHEON Single-stranded DNA-binding protein OS=Shewanella on...", "score": 38, "evalue": 0.001 }}, {"summary_entry": { "description": "sp|Q8DSD8|SSB_STRMU Single-stranded DNA-binding protein OS=Streptococcus...", "score": 40, "evalue": 0.001 }}, {"summary_entry": { "description": "sp|Q8CNK0|SSB_STAES Single-stranded DNA-binding protein OS=Staphylococcu...", "score": 39, "evalue": 0.001 }}, {"summary_entry": { "description": "sp|Q93GP7|SSB2_SALTY Single-stranded DNA-binding protein 2 OS=Salmonella...", "score": 40, "evalue": 0.0011 }}, {"summary_entry": { "description": "sp|Q8KB47|SSB1_CHLTE Single-stranded DNA-binding protein 1 OS=Chlorobacu...", "score": 39, "evalue": 0.0011 }}, {"summary_entry": { "description": "sp|P0DF76|SSB_STRP3 Single-stranded DNA-binding protein OS=Streptococcus...", "score": 40, "evalue": 0.0011 }}, {"summary_entry": { "description": "2VW9_B SINGLE-STRANDED DNA BINDING PROTEIN; DNA REPLICATION, SINGLE-STRA...", "score": 39, "evalue": 0.0011 }}, {"summary_entry": { "description": "6CQO_E Single-stranded DNA-binding protein RIM1, mitochondrial; Mitochon...", "score": 39, "evalue": 0.0012 }}, {"summary_entry": { "description": "sp|Q7MH89|PRIB_VIBVY Primosomal replication protein N OS=Vibrio vulnific...", "score": 38, "evalue": 0.0012 }}, {"summary_entry": { "description": "3KLW_B Primosomal replication protein n; STRUCTURAL GENOMICS, PSI-2, PRO...", "score": 37, "evalue": 0.0012 }}, {"summary_entry": { "description": "sp|Q928X8|SSB3_LISIN Single-stranded DNA-binding protein 3 OS=Listeria i...", "score": 40, "evalue": 0.0012 }}, {"summary_entry": { "description": "1QVC_C SINGLE STRANDED DNA BINDING PROTEIN MONOMER; BETA-BARREL, SINGLE ...", "score": 39, "evalue": 0.0013 }}, {"summary_entry": { "description": "sp|Q82CI4|SSB2_STRAW Single-stranded DNA-binding protein 2 OS=Streptomyc...", "score": 39, "evalue": 0.0013 }}, {"summary_entry": { "description": "sp|Q98PV9|SSB_MYCPU Single-stranded DNA-binding protein OS=Mycoplasma pu...", "score": 40, "evalue": 0.0013 }}, {"summary_entry": { "description": "sp|B8A5I7|SSBP_DANRE Single-stranded DNA-binding protein, mitochondrial ...", "score": 37, "evalue": 0.0013 }}, {"summary_entry": { "description": "sp|Q88QK5|SSB_PSEPK Single-stranded DNA-binding protein OS=Pseudomonas p...", "score": 39, "evalue": 0.0014 }}, {"summary_entry": { "description": "sp|A5U9U9|PRIB_HAEIE Primosomal replication protein N OS=Haemophilus inf...", "score": 38, "evalue": 0.0014 }}, {"summary_entry": { "description": "sp|Q55499|SSB1_SYNY3 Single-stranded DNA-binding protein 1 OS=Synechocys...", "score": 37, "evalue": 0.0015 }}, {"summary_entry": { "description": "sp|Q9CDM9|SSB2_LACLA Single-stranded DNA-binding protein 2 OS=Lactococcu...", "score": 39, "evalue": 0.0015 }}, {"summary_entry": { "description": "sp|P59931|SSB_HELHP Single-stranded DNA-binding protein OS=Helicobacter ...", "score": 39, "evalue": 0.0015 }}, {"summary_entry": { "description": "sp|P0A4K0|SSB1_NOSS1 Single-stranded DNA-binding protein 1 OS=Nostoc sp....", "score": 38, "evalue": 0.0016 }}, {"summary_entry": { "description": "sp|Q92FR5|SSB1_LISIN Single-stranded DNA-binding protein 1 OS=Listeria i...", "score": 40, "evalue": 0.0017 }}, {"summary_entry": { "description": "sp|Q6LM42|PRIB_PHOPR Primosomal replication protein N OS=Photobacterium ...", "score": 38, "evalue": 0.0017 }}, {"summary_entry": { "description": "sp|Q9A894|SSB_CAUVC Single-stranded DNA-binding protein OS=Caulobacter v...", "score": 39, "evalue": 0.0017 }}, {"summary_entry": { "description": "sp|Q5HIS8|SSB1_STAAC Single-stranded DNA-binding protein 1 OS=Staphyloco...", "score": 39, "evalue": 0.0017 }}, {"summary_entry": { "description": "sp|Q8L2A6|SSB_PROVU Single-stranded DNA-binding protein OS=Proteus vulga...", "score": 39, "evalue": 0.0018 }}, {"summary_entry": { "description": "sp|P66850|SSB1_STRA3 Single-stranded DNA-binding protein 1 OS=Streptococ...", "score": 39, "evalue": 0.0019 }}, {"summary_entry": { "description": "3VDY_A Single-stranded DNA-binding protein ssbB; OB fold, single-strand ...", "score": 38, "evalue": 0.0019 }}, {"summary_entry": { "description": "sp|Q9AFI5|SSB_MYCS2 Single-stranded DNA-binding protein OS=Mycolicibacte...", "score": 38, "evalue": 0.002 }}, {"summary_entry": { "description": "sp|Q87LA3|SSB_VIBPA Single-stranded DNA-binding protein OS=Vibrio paraha...", "score": 39, "evalue": 0.0021 }}, {"summary_entry": { "description": "sp|P37455|SSBA_BACSU Single-stranded DNA-binding protein A OS=Bacillus s...", "score": 39, "evalue": 0.0021 }}, {"summary_entry": { "description": "sp|Q8Y2B4|SSB_RALSO Single-stranded DNA-binding protein OS=Ralstonia sol...", "score": 39, "evalue": 0.0021 }}, {"summary_entry": { "description": "sp|Q9P7N0|MUG11_SCHPO Meiotically up-regulated gene 11 protein OS=Schizo...", "score": 44, "evalue": 0.0024 }}, {"summary_entry": { "description": "sp|P0C118|SSB_BRUAB Single-stranded DNA-binding protein OS=Brucella abor...", "score": 39, "evalue": 0.0024 }}, {"summary_entry": { "description": "sp|Q9ZJY2|SSB_HELPJ Single-stranded DNA-binding protein OS=Helicobacter ...", "score": 39, "evalue": 0.0026 }}, {"summary_entry": { "description": "sp|Q9KUW2|SSB_VIBCH Single-stranded DNA-binding protein OS=Vibrio choler...", "score": 38, "evalue": 0.0026 }}, {"summary_entry": { "description": "sp|P0A611|SSB_MYCBO Single-stranded DNA-binding protein OS=Mycobacterium...", "score": 38, "evalue": 0.0028 }}, {"summary_entry": { "description": "sp|Q57YG2|TB927_TRYB2 Uncharacterized protein Tb927.8.680, mitochondrial...", "score": 38, "evalue": 0.0031 }}, {"summary_entry": { "description": "sp|Q8DCJ0|SSB_VIBVU Single-stranded DNA-binding protein OS=Vibrio vulnif...", "score": 38, "evalue": 0.0031 }}, {"summary_entry": { "description": "sp|Q58559|RPA_METJA Replication factor A OS=Methanocaldococcus jannaschi...", "score": 44, "evalue": 0.0034 }}, {"summary_entry": { "description": "6RUP_A Single-stranded DNA-binding protein, mitochondrial; Single-strand...", "score": 37, "evalue": 0.0036 }}, {"summary_entry": { "description": "sp|O83101|SSB_TREPA Single-stranded DNA-binding protein OS=Treponema pal...", "score": 38, "evalue": 0.0037 }}, {"summary_entry": { "description": "3LGJ_B Single-stranded DNA-binding protein; NIAID, Cat Scratch Fever, Ro...", "score": 37, "evalue": 0.0038 }}, {"summary_entry": { "description": "sp|Q89L50|SSB_BRADU Single-stranded DNA-binding protein OS=Bradyrhizobiu...", "score": 38, "evalue": 0.0039 }}, {"summary_entry": { "description": "sp|Q1RK72|SSB_RICBR Single-stranded DNA-binding protein OS=Rickettsia be...", "score": 37, "evalue": 0.0039 }}, {"summary_entry": { "description": "sp|Q9CLN9|PRIB_PASMU Primosomal replication protein N OS=Pasteurella mul...", "score": 36, "evalue": 0.004 }}, {"summary_entry": { "description": "sp|O69302|SSB_CAMJE Single-stranded DNA-binding protein OS=Campylobacter...", "score": 38, "evalue": 0.004 }}, {"summary_entry": { "description": "sp|A3N1H2|PRIB_ACTP2 Primosomal replication protein N OS=Actinobacillus ...", "score": 36, "evalue": 0.0043 }}, {"summary_entry": { "description": "sp|Q8G757|SSB_BIFLO Single-stranded DNA-binding protein OS=Bifidobacteri...", "score": 36, "evalue": 0.0045 }}, {"summary_entry": { "description": "sp|Q9RHF4|SSB2_SALTI Single-stranded DNA-binding protein 2 OS=Salmonella...", "score": 38, "evalue": 0.0048 }}, {"summary_entry": { "description": "sp|A6VMD5|PRIB_ACTSZ Primosomal replication protein N OS=Actinobacillus ...", "score": 36, "evalue": 0.0049 }}, {"summary_entry": { "description": "sp|Q8GAN5|SSB_PAENI Single-stranded DNA-binding protein OS=Paenarthrobac...", "score": 38, "evalue": 0.0051 }}, {"summary_entry": { "description": "sp|Q87L73|PRIB_VIBPA Primosomal replication protein N OS=Vibrio parahaem...", "score": 36, "evalue": 0.0052 }}, {"summary_entry": { "description": "sp|O27438|RPA_METTH Replication factor A OS=Methanothermobacter thermaut...", "score": 45, "evalue": 0.0055 }}, {"summary_entry": { "description": "3ULP_A Single-strand binding protein; OB-fold, DNA binding, single-stran...", "score": 37, "evalue": 0.0057 }}, {"summary_entry": { "description": "sp|B4F276|PRIB_PROMH Primosomal replication protein N OS=Proteus mirabil...", "score": 36, "evalue": 0.0059 }}, {"summary_entry": { "description": "sp|Q8CX55|SSB_OCEIH Single-stranded DNA-binding protein OS=Oceanobacillu...", "score": 37, "evalue": 0.0061 }}, {"summary_entry": { "description": "3KOJ_A uncharacterized protein ycf41; single-strand binding protein fami...", "score": 35, "evalue": 0.0061 }}, {"summary_entry": { "description": "sp|P46390|SSB_MYCLE Single-stranded DNA-binding protein OS=Mycobacterium...", "score": 37, "evalue": 0.0061 }}, {"summary_entry": { "description": "3K8A_B Putative primosomal replication protein; beta-barrel, OB-fold, DN...", "score": 35, "evalue": 0.0064 }}, {"summary_entry": { "description": "sp|P75542|SSB_MYCPN Single-stranded DNA-binding protein OS=Mycoplasma pn...", "score": 38, "evalue": 0.0065 }}, {"summary_entry": { "description": "sp|P47337|SSB_MYCGE Single-stranded DNA-binding protein OS=Mycoplasma ge...", "score": 37, "evalue": 0.0066 }}, {"summary_entry": { "description": "sp|C6DE14|PRIB_PECCP Primosomal replication protein N OS=Pectobacterium ...", "score": 35, "evalue": 0.0069 }}, {"summary_entry": { "description": "5GQO_B Single-stranded DNA-binding protein; OB fold, inter-subunit clamp...", "score": 37, "evalue": 0.0072 }}, {"summary_entry": { "description": "sp|Q9K5N9|SSB_ALKHC Single-stranded DNA-binding protein OS=Alkalihalobac...", "score": 37, "evalue": 0.0077 }}, {"summary_entry": { "description": "sp|Q8EWT6|SSB_MALP2 Single-stranded DNA-binding protein OS=Malacoplasma ...", "score": 38, "evalue": 0.0096 }}, {"summary_entry": { "description": "sp|P0A2F6|SSB1_SALTY Single-stranded DNA-binding protein 1 OS=Salmonella...", "score": 36, "evalue": 0.0099 }}, {"summary_entry": { "description": "7F5Y_A Single-stranded DNA-binding protein; DNA binding, quaternary stru...", "score": 36, "evalue": 0.01 }}, {"summary_entry": { "description": "sp|P66856|SSB2_TROWT Single-stranded DNA-binding protein 2 OS=Tropheryma...", "score": 36, "evalue": 0.01 }}, {"summary_entry": { "description": "sp|A8G8W5|PRIB_SERP5 Primosomal replication protein N OS=Serratia protea...", "score": 35, "evalue": 0.01 }}, {"summary_entry": { "description": "sp|Q7VMD6|PRIB_HAEDU Primosomal replication protein N OS=Haemophilus duc...", "score": 36, "evalue": 0.01 }}, {"summary_entry": { "description": "sp|Q82XQ7|PRIB_NITEU Primosomal replication protein N OS=Nitrosomonas eu...", "score": 35, "evalue": 0.011 }}, {"summary_entry": { "description": "sp|B0US44|PRIB_HISS2 Primosomal replication protein N OS=Histophilus som...", "score": 35, "evalue": 0.011 }}, {"summary_entry": { "description": "sp|Q81JI3|SSB_BACAN Single-stranded DNA-binding protein OS=Bacillus anth...", "score": 37, "evalue": 0.011 }}, {"summary_entry": { "description": "sp|Q8KSB6|SSB_PAEAU Single-stranded DNA-binding protein OS=Paenarthrobac...", "score": 36, "evalue": 0.011 }}, {"summary_entry": { "description": "sp|P67673|PRIB_BORPE Primosomal replication protein N OS=Bordetella pert...", "score": 35, "evalue": 0.013 }}, {"summary_entry": { "description": "5XGT_B Single-stranded DNA-binding protein; single-strand DNA binding pr...", "score": 34, "evalue": 0.013 }}, {"summary_entry": { "description": "sp|Q8Y4X1|SSB2_LISMO Single-stranded DNA-binding protein 2 OS=Listeria m...", "score": 36, "evalue": 0.014 }}, {"summary_entry": { "description": "sp|Q98M41|SSB_RHILO Single-stranded DNA-binding protein OS=Mesorhizobium...", "score": 36, "evalue": 0.014 }}, {"summary_entry": { "description": "sp|Q9ZAQ8|SSB_CERS4 Single-stranded DNA-binding protein OS=Cereibacter s...", "score": 36, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|P32445|RIM1_YEAST Single-stranded DNA-binding protein RIM1, mitochond...", "score": 34, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|Q8VMM4|SSB2_PSEPU Single-stranded DNA-binding protein OS=Pseudomonas ...", "score": 36, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|Q83N34|SSB1_TROWT Single-stranded DNA-binding protein 1 OS=Tropheryma...", "score": 36, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|Q890K1|SSB_LACPL Single-stranded DNA-binding protein OS=Lactobacillus...", "score": 37, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|P49536|YCF41_TRICV Putative single-stranded DNA-binding protein ycf41...", "score": 35, "evalue": 0.016 }}, {"summary_entry": { "description": "sp|Q9PPT7|SSB_UREPA Single-stranded DNA-binding protein OS=Ureaplasma pa...", "score": 36, "evalue": 0.018 }}, {"summary_entry": { "description": "sp|P54622|SSBP_DROME Single-stranded DNA-binding protein, mitochondrial ...", "score": 34, "evalue": 0.019 }}, {"summary_entry": { "description": "4FDB_A Probable primosomal replication protein n; Structural Genomics, P...", "score": 33, "evalue": 0.02 }}, {"summary_entry": { "description": "sp|Q9KYI9|SSB1_STRCO Single-stranded DNA-binding protein 1 OS=Streptomyc...", "score": 35, "evalue": 0.021 }}, {"summary_entry": { "description": "sp|Q9KUZ1|PRIB_VIBCH Primosomal replication protein N OS=Vibrio cholerae...", "score": 34, "evalue": 0.022 }}, {"summary_entry": { "description": "sp|Q1XDQ0|YCF41_NEOYE Putative single-stranded DNA-binding protein ycf41...", "score": 34, "evalue": 0.024 }}, {"summary_entry": { "description": "sp|O14087|RIM1_SCHPO Single-stranded DNA-binding protein rim1, mitochond...", "score": 34, "evalue": 0.026 }}, {"summary_entry": { "description": "sp|A1JIS9|PRIB_YERE8 Primosomal replication protein N OS=Yersinia entero...", "score": 34, "evalue": 0.027 }}, {"summary_entry": { "description": "sp|Q8UF87|SSB_AGRFC Single-stranded DNA-binding protein OS=Agrobacterium...", "score": 35, "evalue": 0.028 }}, {"summary_entry": { "description": "sp|P28042|SSBP_RAT Single-stranded DNA-binding protein, mitochondrial OS...", "score": 34, "evalue": 0.031 }}, {"summary_entry": { "description": "sp|Q82FG5|SSB1_STRAW Single-stranded DNA-binding protein 1 OS=Streptomyc...", "score": 35, "evalue": 0.035 }}, {"summary_entry": { "description": "sp|Q889U1|SSB_PSESM Single-stranded DNA-binding protein OS=Pseudomonas s...", "score": 35, "evalue": 0.04 }}, {"summary_entry": { "description": "sp|Q9CYR0|SSBP_MOUSE Single-stranded DNA-binding protein, mitochondrial ...", "score": 34, "evalue": 0.041 }}, {"summary_entry": { "description": "sp|P34496|MTSS1_CAEEL Single-stranded DNA-binding protein, mitochondrial...", "score": 34, "evalue": 0.043 }}, {"summary_entry": { "description": "sp|P03672|G5P_BPPF3 DNA-Binding protein G5P OS=Pseudomonas phage Pf3 OX=...", "score": 31, "evalue": 0.043 }}, {"summary_entry": { "description": "sp|Q97W73|SSB_SACS2 Single-stranded DNA binding protein Ssb OS=Saccharol...", "score": 34, "evalue": 0.05 }}, {"summary_entry": { "description": "sp|P56898|SSB_RHIME Single-stranded DNA-binding protein OS=Rhizobium mel...", "score": 35, "evalue": 0.051 }}, {"summary_entry": { "description": "sp|Q8NLG0|SSB_CORGL Single-stranded DNA-binding protein OS=Corynebacteri...", "score": 33, "evalue": 0.052 }}, {"summary_entry": { "description": "4DAM_E Single-stranded DNA-binding protein 1; OB-fold, DNA-binding, sing...", "score": 33, "evalue": 0.056 }}, {"summary_entry": { "description": "sp|P18310|SSBF_ECOLI Plasmid-derived single-stranded DNA-binding protein...", "score": 34, "evalue": 0.059 }}, {"summary_entry": { "description": "4DNI_A Fusion protein of RNA-editing complex proteins MP42 and MP18; KRE...", "score": 37, "evalue": 0.059 }}, {"summary_entry": { "description": "4DKA_D RNA-editing complex protein MP81; KREPA1, VHH, Single domain anti...", "score": 32, "evalue": 0.06 }}, {"summary_entry": { "description": "sp|Q9X8U3|SSB2_STRCO Single-stranded DNA-binding protein 2 OS=Streptomyc...", "score": 34, "evalue": 0.073 }}, {"summary_entry": { "description": "3FHW_A Primosomal replication protein n; priB BpR162 X-RAY NESG, Structu...", "score": 32, "evalue": 0.074 }}, {"summary_entry": { "description": "2K50_A Replication factor A related protein; uncharacterized protein, St...", "score": 32, "evalue": 0.079 }}, {"summary_entry": { "description": "1V1Q_A PRIMOSOMAL REPLICATION PROTEIN N; PRIMOSOME, DNA REPLICATION, DNA...", "score": 33, "evalue": 0.089 }}, {"summary_entry": { "description": "sp|P18022|SSBP_ECOLX Plasmid-derived single-stranded DNA-binding protein...", "score": 34, "evalue": 0.099 }}, {"summary_entry": { "description": "2HQL_F Hypothetical protein MG376 homolog; Structural genomics, conserve...", "score": 32, "evalue": 0.11 }}, {"summary_entry": { "description": "sp|Q8FLP9|SSB_COREF Single-stranded DNA-binding protein OS=Corynebacteri...", "score": 32, "evalue": 0.12 }}, {"summary_entry": { "description": "sp|O43952|TGP1_TETTH G-quartet DNA-binding protein TGP1 OS=Tetrahymena t...", "score": 38, "evalue": 0.13 }}, {"summary_entry": { "description": "5WQV_A Primosomal replication protein N; DNA binding protein, Bacterial ...", "score": 31, "evalue": 0.17 }}, {"summary_entry": { "description": "3STB_C RNA-editing complex protein MP42; RNA EDITING, Editosome, Nanobod...", "score": 32, "evalue": 0.17 }}, {"summary_entry": { "description": "sp|Q8GXH3|OSB2_ARATH Protein OSB2, chloroplastic OS=Arabidopsis thaliana...", "score": 33, "evalue": 0.18 }}, {"summary_entry": { "description": "sp|O31908|YORF_BACSU SPbeta prophage-derived uncharacterized protein Yor...", "score": 36, "evalue": 0.21 }}, {"summary_entry": { "description": "sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana...", "score": 33, "evalue": 0.23 }}, {"summary_entry": { "description": "sp|O13988|POT1_SCHPO Protection of telomeres protein 1 OS=Schizosaccharo...", "score": 36, "evalue": 0.25 }}, {"summary_entry": { "description": "1O7I_A SINGLE STRANDED DNA BINDING PROTEIN; SINGLE STRANDED DNA, OB FOLD...", "score": 31, "evalue": 0.27 }}, {"summary_entry": { "description": "3F1Z_B putative nucleic acid-binding lipoprotein; YP_001337197.1, putati...", "score": 32, "evalue": 0.28 }}, {"summary_entry": { "description": "sp|Q9FHJ6|RFA1C_ARATH Replication protein A 70 kDa DNA-binding subunit C...", "score": 36, "evalue": 0.29 }}, {"summary_entry": { "description": "sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C...", "score": 35, "evalue": 0.37 }}, {"summary_entry": { "description": "sp|Q6NSI4|RADX_HUMAN RPA-related protein RADX OS=Homo sapiens OX=9606 GN...", "score": 35, "evalue": 0.39 }}, {"summary_entry": { "description": "sp|P22336|RFA1_YEAST Replication factor A protein 1 OS=Saccharomyces cer...", "score": 36, "evalue": 0.42 }}, {"summary_entry": { "description": "sp|Q8GWJ4|OSB3_ARATH Protein OSB3, chloroplastic\/mitochondrial OS=Arabi...", "score": 32, "evalue": 0.46 }}, {"summary_entry": { "description": "1XJV_A Protection of telomeres 1; telomere protein-DNA complex single-st...", "score": 34, "evalue": 0.48 }}, {"summary_entry": { "description": "sp|F4JSG3|RFA1E_ARATH Replication protein A 70 kDa DNA-binding subunit E...", "score": 35, "evalue": 0.6 }}, {"summary_entry": { "description": "sp|D8UYN9|RFA1_TETTS Replication protein A 70 kDa DNA-binding subunit OS...", "score": 36, "evalue": 0.61 }}, {"summary_entry": { "description": "sp|Q8C779|RADX_MOUSE RPA-related protein RADX OS=Mus musculus OX=10090 G...", "score": 35, "evalue": 0.62 }}, {"summary_entry": { "description": "sp|Q5FVP2|SOSB2_RAT SOSS complex subunit B2 OS=Rattus norvegicus OX=1011...", "score": 32, "evalue": 0.73 }}, {"summary_entry": { "description": "sp|Q9FME0|RFA1D_ARATH Replication protein A 70 kDa DNA-binding subunit D...", "score": 34, "evalue": 0.77 }}, {"summary_entry": { "description": "sp|Q84J78|SSBP_ARATH Single-stranded DNA-binding protein, mitochondrial ...", "score": 31, "evalue": 0.79 }}, {"summary_entry": { "description": "sp|Q9FYJ2|OSB4_ARATH Protein OSB4, chloroplastic OS=Arabidopsis thaliana...", "score": 31, "evalue": 1.2 }}, {"summary_entry": { "description": "sp|Q92372|RFA1_SCHPO Replication factor A protein 1 OS=Schizosaccharomyc...", "score": 33, "evalue": 1.3 }}, {"summary_entry": { "description": "sp|Q9CDT7|DPO3_LACLA DNA polymerase III PolC-type OS=Lactococcus lactis ...", "score": 33, "evalue": 1.4 }}, {"summary_entry": { "description": "sp|Q9SKI4|RFA1A_ARATH Replication protein A 70 kDa DNA-binding subunit A...", "score": 33, "evalue": 1.4 }}, {"summary_entry": { "description": "1K8G_C Telomere-Binding Protein alpha Subunit; Protein-DNA Complex, telo...", "score": 32, "evalue": 1.6 }}, {"summary_entry": { "description": "sp|Q4R8G6|MEIOB_MACFA Meiosis-specific with OB domain-containing protein...", "score": 32, "evalue": 1.6 }}, {"summary_entry": { "description": "sp|Q6YZ49|RFA1A_ORYSJ Replication protein A 70 kDa DNA-binding subunit A...", "score": 33, "evalue": 1.9 }}, {"summary_entry": { "description": "sp|Q56Y52|POT1A_ARATH Protection of telomeres protein 1a OS=Arabidopsis ...", "score": 32, "evalue": 2 }}, {"summary_entry": { "description": "sp|Q8VEE4|RFA1_MOUSE Replication protein A 70 kDa DNA-binding subunit OS...", "score": 33, "evalue": 2.2 }}, {"summary_entry": { "description": "sp|Q19537|RFA1_CAEEL Probable replication factor A 73 kDa subunit OS=Cae...", "score": 33, "evalue": 2.2 }}, {"summary_entry": { "description": "sp|Q5ZJJ2|RFA1_CHICK Replication protein A 70 kDa DNA-binding subunit OS...", "score": 32, "evalue": 2.5 }}, {"summary_entry": { "description": "sp|Q9W3M9|HDM_DROME Protein hold'em OS=Drosophila melanogaster OX=7227 G...", "score": 32, "evalue": 2.7 }}, {"summary_entry": { "description": "7CUH_A Protection of telomeres protein 1; telomere, protein-ssDNA comple...", "score": 31, "evalue": 2.7 }}, {"summary_entry": { "description": "sp|P62597|POTE1_CHICK Protection of telomeres protein 1 OS=Gallus gallus...", "score": 33, "evalue": 2.8 }}, {"summary_entry": { "description": "sp|Q10Q08|RFA1B_ORYSJ Replication protein A 70 kDa DNA-binding subunit B...", "score": 32, "evalue": 3 }}, {"summary_entry": { "description": "sp|O97472|RFA1_CAEBR Probable replication factor A 73 kDa subunit OS=Cae...", "score": 32, "evalue": 4 }}, {"summary_entry": { "description": "sp|Q23696|RFA1_CRIFA Replication factor A 51 kDa subunit OS=Crithidia fa...", "score": 30, "evalue": 5.5 }}, {"summary_entry": { "description": "sp|Q6NY74|RFA1_DANRE Replication protein A 70 kDa DNA-binding subunit OS...", "score": 31, "evalue": 5.8 }}, {"summary_entry": { "description": "7QXS_P Protection of telomeres protein 1; Reverse transcriptase, ribonuc...", "score": 32, "evalue": 6.4 }}, {"summary_entry": { "description": "sp|Q91WC1|POTE1_MOUSE Protection of telomeres protein 1 OS=Mus musculus ...", "score": 31, "evalue": 7.9 }}, {"summary_entry": { "description": "sp|P27694|RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit OS...", "score": 31, "evalue": 7.9 }}, {"summary_entry": { "description": "sp|Q24492|RFA1_DROME Replication protein A 70 kDa DNA-binding subunit OS...", "score": 31, "evalue": 9.6 }} ], "search_hits": [ {"hit_record": { "target_description": "sp|Q8DXI7|SSB4_STRA5 Single-stranded DNA-binding protein 4 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 \/ 2603 V\/R) OX=208435 GN=ssb4 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 138, "target_eno": 11.0, "alignment": { "score": 47.65, "bit_score": 53.3, "evalue": 1.1e-06, "pvalue": 1.1e-06, "n_identities": 9, "n_positives": 67, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeee eeeeeeeee hhhhhh eeeeeeeeee eee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLIGRLTRDVELRYT--PSN-IANATFNLAVNRNFKNAAGDREADFINCVMWRQQAENLANWTKKGMLIGITGRIQTRSYENQQGQRIYVTEVVADSFQ", "middle": "+++G+++++ ++++ +++ ++++F+L++++++ +++I++++++++++ L +++G++++++++I++R++++ +++++++A++++", "computed_K_ungapped": "0.1353", "computed_lambda_ungapped": "1.0610", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5334", "entropy": 0.2296, "expected_score": -0.2139, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8E0Z9|SSB3_STRA5 Single-stranded DNA-binding protein 3 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 \/ 2603 V\/R) OX=208435 GN=ssb3 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 138, "target_eno": 11.0, "alignment": { "score": 46.63, "bit_score": 52.2, "evalue": 2.4e-06, "pvalue": 2.4e-06, "n_identities": 11, "n_positives": 65, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeeee hhhhhhh eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRMTKDAELRYTPS--N-QAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRIYVTEVVAENFQ", "middle": "+++G+++++ ++++ +S + ++++F+L++++ +++++I+++++++++++L +++G++V+++++I+ R++++ +++++++A++++", "computed_K_ungapped": "0.1358", "computed_lambda_ungapped": "1.0713", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5385", "entropy": 0.2340, "expected_score": -0.2143, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P60471|SSB_ONYPE Single-stranded DNA-binding protein OS=Onion yellows phytoplasma (strain OY-M) OX=262768 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 104, "target_eno": 12.0, "alignment": { "score": 45.41, "bit_score": 50.1, "evalue": 1e-05, "pvalue": 1e-05, "n_identities": 15, "n_positives": 63, "n_gaps": 8, "aln_length": 92, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeee eeeeeeeee eeeeee eeeeeee eeeeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "QLIGNITHDLEQQYINTNEGKIPKVNFQLAVNNKDTTQFIPCVVFRNQADNMFMYLHKGSKVYVEGTLSIEKYINNESENKTSTKVIVQRVI", "middle": " ++G+I++ L++Q+ ++++G+ +K++F+L++++ +++++I++++F++++D++ ++++G++V+V+++++ +++++ ++ ++++++R++", "computed_K_ungapped": "0.1204", "computed_lambda_ungapped": "0.9268", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4659", "entropy": 0.1771, "expected_score": -0.1918, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8E220|SSB2_STRA5 Single-stranded DNA-binding protein 2 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 \/ 2603 V\/R) OX=208435 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 131, "target_eno": 12.0, "alignment": { "score": 44.44, "bit_score": 49.8, "evalue": 1.2e-05, "pvalue": 1.2e-05, "n_identities": 9, "n_positives": 65, "n_gaps": 17, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeeeeeeee eeeeeeeee hhh eeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "IMIGRLTAKPEMVKTP--TD-KSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTRKYEKDGQTHYITEVLASSFQ", "middle": "+++G+++A ++++ + ++ +++++++++++ + +++I+++++G++++ L + +++G+++++++++++R+++ G +++++++A +++", "computed_K_ungapped": "0.1331", "computed_lambda_ungapped": "1.0557", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5307", "entropy": 0.2378, "expected_score": -0.2204, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q5HJ26|SSB2_STAAC Single-stranded DNA-binding protein 2 OS=Staphylococcus aureus (strain COL) OX=93062 GN=ssb-p PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 139, "target_eno": 12.0, "alignment": { "score": 44.73, "bit_score": 49.7, "evalue": 1.3e-05, "pvalue": 1.3e-05, "n_identities": 11, "n_positives": 65, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeeee eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPELRSTPN--G-VNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTRSYDNKEGRRVFVTEVVADSVQ", "middle": "+++G++++ +++S ++ G ++++F+L++++ + +++I++++F+++++++ ++++G++++V++++++R++++ +++++++A++++", "computed_K_ungapped": "0.1355", "computed_lambda_ungapped": "1.0528", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5292", "entropy": 0.2245, "expected_score": -0.2116, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P73145|SSB2_SYNY3 Thylakoid-associated single-stranded DNA-binding protein slr1034 OS=Synechocystis sp. (strain PCC 6803 \/ Kazusa) OX=1111708 GN=slr1034 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 129, "target_eno": 12.0, "alignment": { "score": 45.30, "bit_score": 49.7, "evalue": 1.3e-05, "pvalue": 1.3e-05, "n_identities": 11, "n_positives": 65, "n_gaps": 13, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee eeeeeeeeee ee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLMATVIREPELRFTK-ENQ-TPVCEFLVEFPGMRDDSPKESLKVVGWGNLANTIKETYHPGDRLIIEGRLGMNMIERQEGFKEKRAELTASRIS", "middle": "++++++I+ ++++ + +N+ +++EF++E+++ +++++++++++G+ ++++ +++GD+++++++++++++++ +++++++A+RI+", "computed_K_ungapped": "0.1330", "computed_lambda_ungapped": "1.0335", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5195", "entropy": 0.2251, "expected_score": -0.2194, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8R6M2|SSB_CALS4 Single-stranded DNA-binding protein OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 \/ JCM 11007 \/ NBRC 100824 \/ MB4) OX=273068 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 150, "target_eno": 10.0, "alignment": { "score": 44.71, "bit_score": 49.5, "evalue": 1.5e-05, "pvalue": 1.5e-05, "n_identities": 13, "n_positives": 61, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ--------YPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGRLTKDPVMRYTS--DM-VPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLVAVTGSIQTRTWDDSSGNRHWVTEVVADDVR", "middle": " ++G+++++ ++++ + ++ ++ +F+L+++++ +++I++++++++++++ N +++G++V+V+++I+ R+W++ +W+++++A++++", "computed_K_ungapped": "0.1454", "computed_lambda_ungapped": "1.0824", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5441", "entropy": 0.2561, "expected_score": -0.2280, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q899R2|SSB_CLOTE Single-stranded DNA-binding protein OS=Clostridium tetani (strain Massachusetts \/ E88) OX=212717 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 145, "target_eno": 11.0, "alignment": { "score": 45.67, "bit_score": 49.4, "evalue": 1.6e-05, "pvalue": 1.6e-05, "n_identities": 12, "n_positives": 64, "n_gaps": 16, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eee eeeeeeeee eeeeeeeee eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLIGRLTKDPELKFTP--GTGTAVTTFVLAVDRRFSKDGKNEADFIPVVVWGKQAESTANYMSKGKLIGISGRIQTRSYEAKDGTRRYVTEVVADEVK", "middle": " ++G+++++ ++++ + +++ ++++FVL++++++ +++I+++++G++++++ +++G+++++S++I+ R++++ R++++++A++++", "computed_K_ungapped": "0.1255", "computed_lambda_ungapped": "0.9878", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4965", "entropy": 0.2005, "expected_score": -0.2027, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q97CX3|SSB3_CLOAB Single-stranded DNA-binding protein 3 OS=Clostridium acetobutylicum (strain ATCC 824 \/ DSM 792 \/ JCM 1419 \/ LMG 5710 \/ VKM B-1787) OX=272562 GN=ssb3 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 144, "target_eno": 11.0, "alignment": { "score": 44.10, "bit_score": 49.2, "evalue": 1.9e-05, "pvalue": 1.9e-05, "n_identities": 14, "n_positives": 59, "n_gaps": 16, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeeee hh eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLIGRLTKDPELKFTPG-TG-TAVASFTLAVDRRFKKEGQQEADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYDAKDGTRRYVTEIVAEEVQ", "middle": "+++G++++ +++++++ +G ++++F+L ++++ +++I+++++G++++++ +++G++++VS++I+ R++++ R+ ++I+A +++", "computed_K_ungapped": "0.1327", "computed_lambda_ungapped": "1.0956", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5507", "entropy": 0.2364, "expected_score": -0.2100, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P66854|SSB_STRPN Single-stranded DNA-binding protein OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 \/ TIGR4) OX=170187 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 156, "target_eno": 10.0, "alignment": { "score": 43.28, "bit_score": 48.8, "evalue": 2.4e-05, "pvalue": 2.4e-05, "n_identities": 10, "n_positives": 63, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeee hhhhhhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRMTRDAELRYTP--SN-VAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQ", "middle": "+++G++++ ++++ + ++ ++++F+L++++++ +++I++++++++++ L +++G++++V+++I+ R++++ +++++++A +++", "computed_K_ungapped": "0.1485", "computed_lambda_ungapped": "1.1593", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5828", "entropy": 0.2818, "expected_score": -0.2294, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P66848|SSB_NEIMA Single-stranded DNA-binding protein OS=Neisseria meningitidis serogroup A \/ serotype 4A (strain DSM 15465 \/ Z2491) OX=122587 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 174, "target_eno": 10.0, "alignment": { "score": 44.02, "bit_score": 48.6, "evalue": 2.8e-05, "pvalue": 2.8e-05, "n_identities": 13, "n_positives": 60, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGRLGRDPEVRYMPN--G-EAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANEMK", "middle": "+++G++++ ++++ ++ G ++++F++ T+E + ++++++++++++++ + ++++G++V+++++I+ R+++G R++++I+A++++", "computed_K_ungapped": "0.1412", "computed_lambda_ungapped": "1.1591", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5827", "entropy": 0.2805, "expected_score": -0.2360, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8A7M7|SSB_BACTN Single-stranded DNA-binding protein OS=Bacteroides thetaiotaomicron (strain ATCC 29148 \/ DSM 2079 \/ NCTC 10582 \/ E50 \/ VPI-5482) OX=226186 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 161, "target_eno": 11.0, "alignment": { "score": 43.33, "bit_score": 48.6, "evalue": 2.8e-05, "pvalue": 2.8e-05, "n_identities": 12, "n_positives": 61, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeee eeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGNVGQDPRVKYFDT--G-SAVATFPLATTDRGYTLANGTQIPERTEWHNIVASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQSGAMRYITEIFVDNME", "middle": "+++G++++ ++++ ++ G ++++F+L T++ + ++++++++++++++ + +++GD+++++++I++R++++ R++++I+++++E", "computed_K_ungapped": "0.1110", "computed_lambda_ungapped": "1.1594", "estimated_K_gapped": "0.0014", "estimated_lambda_gapped": "0.5828", "entropy": 0.2395, "expected_score": -0.1947, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8PIJ2|SSB_XANAC Single-stranded DNA-binding protein OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 180, "target_eno": 10.0, "alignment": { "score": 44.09, "bit_score": 48.5, "evalue": 3.1e-05, "pvalue": 3.1e-05, "n_identities": 13, "n_positives": 58, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGNLGNDPDTKYTQ--AG-MAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEGELRYDKYTGQDGVEKYSTDIVANEMQ", "middle": " ++G++++ ++++ + +G ++ +++L+T+++ +++++++FFG++++++ +++G++V+V++++++++++G ++ ++I+A +++", "computed_K_ungapped": "0.1452", "computed_lambda_ungapped": "1.1633", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5848", "entropy": 0.2814, "expected_score": -0.2376, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O84048|SSB_CHLTR Single-stranded DNA-binding protein OS=Chlamydia trachomatis (strain D\/UW-3\/Cx) OX=272561 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 157, "target_eno": 10.0, "alignment": { "score": 43.90, "bit_score": 48.4, "evalue": 3.2e-05, "pvalue": 3.2e-05, "n_identities": 11, "n_positives": 59, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeeee eeeeeeee eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "YLVGFLAADPEERMTS--GG-KRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMLPYLKKGSSVIVAGELSLESYVGRDGSPQASISVSVDTLK", "middle": " ++G++ A +E++ + +G ++++++L+++ ++ + +++++++++++D++ +++G++V+V+++++ ++++G ++ +S+++++++", "computed_K_ungapped": "0.1379", "computed_lambda_ungapped": "1.0539", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5298", "entropy": 0.2515, "expected_score": -0.2378, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9XJG4|SSB_BPP1 Single-stranded DNA-binding protein OS=Escherichia phage P1 OX=10678 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 162, "target_eno": 11.0, "alignment": { "score": 44.31, "bit_score": 48.3, "evalue": 3.4e-05, "pvalue": 3.4e-05, "n_identities": 12, "n_positives": 60, "n_gaps": 21, "aln_length": 100, "query_from": 1, "query_to": 82, "target_from": 10, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee eeeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWR", "target_aln": "ILIGTLGQDPEIRYIPN--G-GAVGRLSIATNESWRDKQTGQQKEQTEWHKVVLFGKLAEIASEYLRKGSQVYIEGKLKTRKWTDDAGVERYTTEIIVSQ", "middle": " ++G++++ ++++ ++ G ++++++++T+E ++++++++++FG++++ + +++G++V++++++++R+W++ R++++I++++", "computed_K_ungapped": "0.1352", "computed_lambda_ungapped": "1.1051", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5555", "entropy": 0.2450, "expected_score": -0.2205, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8ZSD2|SSB2_NOSS1 Single-stranded DNA-binding protein 2 OS=Nostoc sp. (strain PCC 7120 \/ SAG 25.82 \/ UTEX 2576) OX=103690 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 127, "target_eno": 11.0, "alignment": { "score": 42.10, "bit_score": 48.2, "evalue": 3.8e-05, "pvalue": 3.8e-05, "n_identities": 11, "n_positives": 62, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeee eee ee eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE----EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "MLVGRCGQEPDLKFFES--G-AVKASISIAVRPPYRSEQALWFDLVAWGNQAEVIGNYVRKGTQIAITGEFGFDRWADKNSGTMRQKPVITINTIE", "middle": "+++G++++ ++++++S G +K +++++++ ++++++++++++G+ ++++ +++G++++++++++ ++W++ R++++I++ +IE", "computed_K_ungapped": "0.1257", "computed_lambda_ungapped": "1.0578", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5317", "entropy": 0.2283, "expected_score": -0.2115, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O51141|SSB_BORBU Single-stranded DNA-binding protein OS=Borrelia burgdorferi (strain ATCC 35210 \/ B31 \/ CIP 102532 \/ DSM 4680) OX=224326 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 149, "target_eno": 10.0, "alignment": { "score": 43.34, "bit_score": 48.1, "evalue": 4e-05, "pvalue": 4e-05, "n_identities": 14, "n_positives": 61, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "VLSGRLTRDSELSY--TESG-MAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVDNLQ", "middle": " ++G++++ ++++ +++G ++++F++++++ +YP+++++++F++++++L +++G++V+VS++++ ++W++ R++++I++++++", "computed_K_ungapped": "0.1381", "computed_lambda_ungapped": "1.0712", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5385", "entropy": 0.2405, "expected_score": -0.2173, "min_score": -2, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8P2H3|SSB1_STRP8 Single-stranded DNA-binding protein 1 OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) OX=186103 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 130, "target_eno": 12.0, "alignment": { "score": 42.85, "bit_score": 48.1, "evalue": 4e-05, "pvalue": 4e-05, "n_identities": 9, "n_positives": 65, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeeeeeee eeeeeee eeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLIGRLTKDVELR--YTPSQ-VACAQFTLAVNRNFKNQDGQKEADFINCVIWRKSAENLSNWAKKGQLIAITGRIQTRNYENQQGQRVYVTEVVAESFQ", "middle": "+++G+++++ +++ ++++ ++++F+L++++ + +++I+++++++ +++L +++G++++++++I+ R++++ +++++++A++++", "computed_K_ungapped": "0.1315", "computed_lambda_ungapped": "1.0819", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5439", "entropy": 0.2327, "expected_score": -0.2114, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q83EP4|SSB_COXBU Single-stranded DNA-binding protein OS=Coxiella burnetii (strain RSA 493 \/ Nine Mile phase I) OX=227377 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 158, "target_eno": 10.0, "alignment": { "score": 43.56, "bit_score": 48.0, "evalue": 4.2e-05, "pvalue": 4.2e-05, "n_identities": 12, "n_positives": 61, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeeeeee eeeeeee hhhhh eeeeeeeeee ee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGNLGQDPEVRYTPN--G-NAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMH", "middle": "+++G++++ ++++ ++ G ++++++L+T++ + +++++++FF+++++ + +++G+++++++++++R+W++ R++++I+A +++", "computed_K_ungapped": "0.1339", "computed_lambda_ungapped": "1.0659", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5358", "entropy": 0.2503, "expected_score": -0.2229, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q87DQ5|SSB_XYLFT Single-stranded DNA-binding protein OS=Xylella fastidiosa (strain Temecula1 \/ ATCC 700964) OX=183190 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 164, "target_eno": 10.0, "alignment": { "score": 43.65, "bit_score": 48.0, "evalue": 4.3e-05, "pvalue": 4.3e-05, "n_identities": 13, "n_positives": 61, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAWRIE", "target_aln": "ILVGNLGNDPDIKYT--QGG-MTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEGSIRYDKFTGQDGQERYVTEIVADEMQ", "middle": "+++G++++ +++++ ++G ++++++L+T++ + +++++++FFG++++ + +++G++++++++I++++++ G R+ ++I+A++++", "computed_K_ungapped": "0.1237", "computed_lambda_ungapped": "1.0667", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5362", "entropy": 0.2239, "expected_score": -0.2001, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P66846|SSB_BORPE Single-stranded DNA-binding protein OS=Bordetella pertussis (strain Tohama I \/ ATCC BAA-589 \/ NCTC 13251) OX=257313 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 10.0, "alignment": { "score": 44.13, "bit_score": 47.8, "evalue": 4.9e-05, "pvalue": 4.9e-05, "n_identities": 11, "n_positives": 61, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeeee eeeeeeee eeeeeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN----G--RWFNSIRAWRIE", "target_aln": "ILVGNLGRDPEVRYSPD--G-AAICNVSIATTSQWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEIVADQMQ", "middle": " ++G++++ ++++ ++ G ++++++++T++ + ++++++++++++++++ +++G++V+++++++ R+W+ G R++++I+A +++", "computed_K_ungapped": "0.1504", "computed_lambda_ungapped": "1.1405", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5733", "entropy": 0.2820, "expected_score": -0.2444, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3PGZ_A Single-stranded DNA-binding protein; SSGCID, BARTONELLA HENSELAE, SINGLE-STRAND BINDING PROTEIN, Seattle Structural Genomics Center for Infectious Disease, DNA BINDING PROTEIN; 2.1A {Bartonella henselae} SCOP: l.1.1.1, b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 193, "target_eno": 11.0, "alignment": { "score": 44.03, "bit_score": 47.8, "evalue": 5e-05, "pvalue": 5e-05, "n_identities": 11, "n_positives": 62, "n_gaps": 22, "aln_length": 100, "query_from": 1, "query_to": 81, "target_from": 30, "target_to": 126, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeeee eeeeeeeee eeeeeee eeeeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-----------PKKICFEFFGD-KIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "ILIGNLGADPEIRRLN--SG-DQVANLRIATSESWRDRNTNERKERTEWHNIVIFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQNGNDRYTTEIVLQ", "middle": "+++G+++A ++++ + +G ++++++++T+E++ ++++++++F++ +++++ + +++G++++++++++ R+W++ R++++I+++", "computed_K_ungapped": "0.1325", "computed_lambda_ungapped": "1.2033", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.6049", "entropy": 0.2760, "expected_score": -0.2228, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9PHE7|SSB1_XYLFA Single-stranded DNA-binding protein 1 OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 136, "target_eno": 12.0, "alignment": { "score": 42.79, "bit_score": 47.7, "evalue": 5.1e-05, "pvalue": 5.1e-05, "n_identities": 15, "n_positives": 56, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee hh eeeeeeeeee eeeeeee eee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-----------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAWRIE", "target_aln": "QLIGNLGADPDIRYMQD--G-TPTVTVSVATTDTWKDKDTGNKEEKTEWHRVVFFGGLAEIVGEFLKKGSQIYVEGALRSRNWTDKEGNKRYTTEIMAKEMQ", "middle": " ++G+++A+ ++++ ++ G ++ +++++T++++ +++++++FFG++ + + +++G++++V+++++ R+W+ G R++++I+A +++", "computed_K_ungapped": "0.1377", "computed_lambda_ungapped": "1.0931", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5495", "entropy": 0.2479, "expected_score": -0.2261, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q5XE77|SSB1_STRP6 Single-stranded DNA-binding protein 1 OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 \/ MGAS10394) OX=286636 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 131, "target_eno": 11.0, "alignment": { "score": 43.39, "bit_score": 47.6, "evalue": 5.6e-05, "pvalue": 5.6e-05, "n_identities": 9, "n_positives": 64, "n_gaps": 17, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeee ee eeeeeeeee hhee eeeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "IAIGRLVAKPELVKTAT--D-KHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQ", "middle": " ++G+++A ++++ ++ + ++ +++L++++ + +++I+++++G+++++L +++G+++++++++++R+++ G ++++++++++++", "computed_K_ungapped": "0.1318", "computed_lambda_ungapped": "1.0084", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5069", "entropy": 0.2058, "expected_score": -0.2016, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q97HT8|SSB2_CLOAB Single-stranded DNA-binding protein 2 OS=Clostridium acetobutylicum (strain ATCC 824 \/ DSM 792 \/ JCM 1419 \/ LMG 5710 \/ VKM B-1787) OX=272562 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 133, "target_eno": 12.0, "alignment": { "score": 43.74, "bit_score": 47.6, "evalue": 5.7e-05, "pvalue": 5.7e-05, "n_identities": 13, "n_positives": 63, "n_gaps": 16, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGRLTKDPELKYIPN-TG-TATCNFTLAVDRRFKKEGQQEADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYDAKDGTRRYVTEVVAEEVK", "middle": " ++G+++++ ++++ ++ +G ++++F+L++++++ +++I+++++G++++++ ++++G++++VS++I+ R++++ R+ ++++A++++", "computed_K_ungapped": "0.1294", "computed_lambda_ungapped": "1.0311", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5183", "entropy": 0.1996, "expected_score": -0.1942, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P59933|SSB_WOLSU Single-stranded DNA-binding protein OS=Wolinella succinogenes (strain ATCC 29543 \/ DSM 1740 \/ LMG 7466 \/ NCTC 11488 \/ FDC 602W) OX=273121 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 162, "target_eno": 11.0, "alignment": { "score": 43.31, "bit_score": 47.3, "evalue": 6.9e-05, "pvalue": 6.9e-05, "n_identities": 11, "n_positives": 60, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeeee eeeeeeee eeeeeee hhhhhhh eeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGNLTRDVELRYLPS--G-SALAKIGIATNRRFKKQDGSQGDEVCFVDVNLFGRTAEIANQYLKKGSKILIEGRLVLESWTDQSGQKRSKHSVTAESLQ", "middle": " ++G++++ ++++ +S G ++++++++T++ ++++++++FG++++ + ++++G++++++++++ ++W++ R+ +S++A++++", "computed_K_ungapped": "0.1341", "computed_lambda_ungapped": "1.0899", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5479", "entropy": 0.2472, "expected_score": -0.2265, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "4MZ9_C Single-stranded DNA-binding protein; Single strand DNA-binding domain, SSB, RecO, ExoI, RecQ, DnaG, HolC, DNA BINDING PROTEIN; 2.2A {Escherichia coli} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 178, "target_eno": 12.0, "alignment": { "score": 43.49, "bit_score": 47.3, "evalue": 7.1e-05, "pvalue": 7.1e-05, "n_identities": 13, "n_positives": 58, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 111, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeeeee eeeeeee eeeeeeee eee eeeeeeeeeee eeeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILVGNLGQDPEVRYMP--NG-GAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQ", "middle": "+++G++ + ++++ + NG ++ +++L+T+E + + ++++++FG++++++ +++G++V++++++++R+W++ R+ ++++++ +++", "computed_K_ungapped": "0.1395", "computed_lambda_ungapped": "1.2318", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6192", "entropy": 0.2825, "expected_score": -0.2238, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3TQY_B Single-stranded DNA-binding protein; DNA replication, TRANSFERASE; HET: MSE; 2.6001A {Coxiella burnetii} SCOP: b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 158, "target_eno": 12.0, "alignment": { "score": 42.43, "bit_score": 47.2, "evalue": 7.3e-05, "pvalue": 7.3e-05, "n_identities": 13, "n_positives": 63, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 12, "target_to": 110, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeee ee eeeeeeeeee ee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGNLGQD--PEVRYTPNG-NAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMH", "middle": " ++G++++ +++ +++NG ++++++L+T++ + +++++++FF+++++++ + +++G+++++++++++R+W++ R++++I+A++++", "computed_K_ungapped": "0.1375", "computed_lambda_ungapped": "1.1555", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5808", "entropy": 0.2390, "expected_score": -0.2077, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q932A8|SSB2_STAAM Single-stranded DNA-binding protein 2 OS=Staphylococcus aureus (strain Mu50 \/ ATCC 700699) OX=158878 GN=ssb-p PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 141, "target_eno": 11.0, "alignment": { "score": 41.42, "bit_score": 47.1, "evalue": 7.9e-05, "pvalue": 7.9e-05, "n_identities": 11, "n_positives": 59, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee hhhhh eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPELRSTPN--G-VNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQ", "middle": "+++G++++ +++S ++ G + ++F+L +++ + +++I++++F++ ++ + +++G++++V++++++R++++ ++ ++++A++++", "computed_K_ungapped": "0.1332", "computed_lambda_ungapped": "1.1560", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5811", "entropy": 0.2585, "expected_score": -0.2142, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "5ODP_A Single-stranded DNA-binding protein; Single-Strand Binding protein, DNA BINDING PROTEIN; 2.535A {Salinibacter ruber (strain DSM 13855 \/ M31)}", "query_length": 84, "query_eno": 7.0, "target_length": 196, "target_eno": 11.0, "alignment": { "score": 43.94, "bit_score": 47.1, "evalue": 8.2e-05, "pvalue": 8.2e-05, "n_identities": 13, "n_positives": 62, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 37, "target_to": 134, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeee eeeeeeeee eeeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY----------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGNLGD--KPELRYTGSG-TAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRLGEICNEYLKKGSQVYFEGKLQTRSWEDRDNNTRYSTEVKAQEMM", "middle": " ++G++ + ++++ ++++G ++++++L+T+E+Y +++++++++G++++++ ++ G++V++++++++R+W++ R++++++A++++", "computed_K_ungapped": "0.1454", "computed_lambda_ungapped": "1.2449", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6258", "entropy": 0.2884, "expected_score": -0.2244, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P77953|SSB_SHEHA Single-stranded DNA-binding protein OS=Shewanella hanedai OX=25 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 226, "target_eno": 4.0, "alignment": { "score": 40.58, "bit_score": 47.0, "evalue": 8.8e-05, "pvalue": 8.8e-05, "n_identities": 11, "n_positives": 60, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 108, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeee hh eeeeeeeeee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "ILVGNLGKDPEVRYMP--NG-NAVANFTVATSESWKDQQGQPQERTEWHNIVMYRRLAEIAGEYLKKGSKIYIEGKLQTSKWQDQATGQDRYKTEINASEMQ", "middle": " ++G++++ ++++ + NG ++++F++ T+E ++++++++++++++++ + +++G++++++++++ ++W++ R+ ++I+A++++", "computed_K_ungapped": "0.1661", "computed_lambda_ungapped": "1.3346", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6709", "entropy": 0.3855, "expected_score": -0.2698, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8D254|SSB_WIGBR Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis OX=36870 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 163, "target_eno": 11.0, "alignment": { "score": 43.38, "bit_score": 46.9, "evalue": 9.3e-05, "pvalue": 9.3e-05, "n_identities": 14, "n_positives": 55, "n_gaps": 21, "aln_length": 99, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeeeee eeeeeeeeee eeeeeeee hhhhhh eeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "ILIGNLGQDPEVRYIP--NG-NAITNLSLATSENWRDKNTGESKEKTEWHRVILFGKLAEVAGEYLKKGSQVYIEGNLQTRKWQDQNGQDRYITEIVVG", "middle": "+++G++++ ++++ + NG ++++++L+T+E ++++++++++FG++++ + +++G++V+++++++ R+W++ R+ ++I++ ", "computed_K_ungapped": "0.1439", "computed_lambda_ungapped": "1.1211", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5635", "entropy": 0.2620, "expected_score": -0.2325, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "6IRQ_B Single-stranded DNA-binding protein; single-strand DNA binding protein, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex; 1.91A {Pseudomonas aeruginosa PAO1}", "query_length": 84, "query_eno": 7.0, "target_length": 121, "target_eno": 12.0, "alignment": { "score": 40.96, "bit_score": 46.9, "evalue": 9.4e-05, "pvalue": 9.4e-05, "n_identities": 16, "n_positives": 54, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee hhhhhhhh eeeeeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGNVGGDPETRYMPN--G-NAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIVVDING", "middle": " ++G++++ ++++ ++ G ++ +++L+T+E + +++++++FFG++ +++ +++G++V+V+++++ R+W+G R+ ++I++++++", "computed_K_ungapped": "0.1189", "computed_lambda_ungapped": "1.1327", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5694", "entropy": 0.2428, "expected_score": -0.2066, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q823K0|SSB_CHLCV Single-stranded DNA-binding protein OS=Chlamydophila caviae (strain ATCC VR-813 \/ DSM 19441 \/ GPIC) OX=227941 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 161, "target_eno": 10.0, "alignment": { "score": 42.80, "bit_score": 46.7, "evalue": 0.00011, "pvalue": 0.00011, "n_identities": 13, "n_positives": 56, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee eeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----YPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "YFVGYLGADPEERMTS--KG-KRVVVLRLGVKSRIGTKDETVWCKCNVWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGTPQSSLVISVDTIK", "middle": " ++G++ A +E++ + +G ++ +++L ++++ ++++ ++++++++D++ + +++G++V+V++DI+ +++++ +++++I++ +I+", "computed_K_ungapped": "0.1454", "computed_lambda_ungapped": "1.0780", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5419", "entropy": 0.2620, "expected_score": -0.2420, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P40947|SSB_PSEAE Single-stranded DNA-binding protein OS=Pseudomonas aeruginosa (strain ATCC 15692 \/ DSM 22644 \/ CIP 104116 \/ JCM 14847 \/ LMG 12228 \/ 1C \/ PRS 101 \/ PAO1) OX=208964 GN=ssb PE=1 SV=3", "query_length": 84, "query_eno": 7.0, "target_length": 165, "target_eno": 11.0, "alignment": { "score": 43.12, "bit_score": 46.5, "evalue": 0.00012, "pvalue": 0.00012, "n_identities": 16, "n_positives": 55, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 110, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeee eeeeeeeeee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILVGNVGGDPETRYMPN--GN-AVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIVVDINGNMQ", "middle": " ++G++++ ++++ ++ G+ ++++++L T+E+ +++++++FFG++++ + +++G++V+V+++++ R+W+G R+ ++I+++ +++", "computed_K_ungapped": "0.1421", "computed_lambda_ungapped": "1.1345", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5703", "entropy": 0.2646, "expected_score": -0.2319, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "6BHW_D Single-stranded DNA-binding protein A; Single-stranded DNA binding protein, DNA Replication, DNA Repair, DNA BINDING PROTEIN; HET: EDO, PEG; 2.208A {Bacillus subtilis (strain 168)} SCOP: b.40.4.0, l.1.1.1", "query_length": 84, "query_eno": 7.0, "target_length": 119, "target_eno": 12.0, "alignment": { "score": 40.62, "bit_score": 46.5, "evalue": 0.00012, "pvalue": 0.00012, "n_identities": 11, "n_positives": 64, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeeee eeeeeeeee hhhhhhhhh eeeeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKD--PELRYTPNG-AAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQ", "middle": "+++G++ + ++ +++NG ++ +F+L++++ +++++I++++++++++++ N +++G++++V++++++R++++ +++++++A++++", "computed_K_ungapped": "0.1290", "computed_lambda_ungapped": "1.0883", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5471", "entropy": 0.2166, "expected_score": -0.1967, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q82S98|SSB_NITEU Single-stranded DNA-binding protein OS=Nitrosomonas europaea (strain ATCC 19718 \/ CIP 103999 \/ KCTC 2705 \/ NBRC 14298) OX=228410 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 149, "target_eno": 11.0, "alignment": { "score": 43.21, "bit_score": 46.5, "evalue": 0.00012, "pvalue": 0.00012, "n_identities": 12, "n_positives": 63, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeee ee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "MLIGNLGRDPEIRYMP--SG-DAMANLNIATTDTWKDKGGEKQERTEWHRVVMFGKQAEIAGEYLKKGSQIYIEGRLQTRKWTDKSNVERYTTEIVADRMQ", "middle": " ++G+++++ ++++++ +G ++++++++T+++ ++++++++FG++++ + + +++G++++++++++ R+W++ R++++I+A+R++", "computed_K_ungapped": "0.1213", "computed_lambda_ungapped": "1.0378", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5217", "entropy": 0.2013, "expected_score": -0.1919, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9CJP4|SSB_PASMU Single-stranded DNA-binding protein OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 11.0, "alignment": { "score": 43.03, "bit_score": 46.4, "evalue": 0.00013, "pvalue": 0.00013, "n_identities": 14, "n_positives": 58, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-----------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IIVGNLGNDPEIRTMP--NG-EAVANISVATSESWIDKNTNERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEGRLKTRKWQDQNGQDRYTTEIQGDVLQ", "middle": " I+G++++ ++++ + NG +++++++ T+E++ +++++++F++++++++ +++G++V+V+++++ R+W++ R++++I++ +++", "computed_K_ungapped": "0.1403", "computed_lambda_ungapped": "1.1273", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5667", "entropy": 0.2612, "expected_score": -0.2277, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A1RNI8|PRIB_SHESW Primosomal replication protein N OS=Shewanella sp. (strain W3-18-1) OX=351745 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 101, "target_eno": 12.0, "alignment": { "score": 39.87, "bit_score": 46.0, "evalue": 0.00017, "pvalue": 0.00017, "n_identities": 18, "n_positives": 52, "n_gaps": 16, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee e ee eeeeeeeeee eeeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTITRSRR---FKSPAG-IAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADNLKAGVEVQVQGFMTLQQGRNGQNRLVIHAENVE", "middle": " ++G+I+++ + +S++G + +++LE+++Q+ +++I+++++G++++++ N+++G+EV+V+ +++ ++++ G++ ++I+A ++E", "computed_K_ungapped": "0.1262", "computed_lambda_ungapped": "0.9661", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4856", "entropy": 0.1958, "expected_score": -0.2025, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P59930|SSB_HAEDU Single-stranded DNA-binding protein OS=Haemophilus ducreyi (strain 35000HP \/ ATCC 700724) OX=233412 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 176, "target_eno": 10.0, "alignment": { "score": 41.59, "bit_score": 45.9, "evalue": 0.00018, "pvalue": 0.00018, "n_identities": 14, "n_positives": 59, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeee eeeeee eeeee eeeeeeeeee eeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IIVGNLGNDPEMRTM--PNG-EAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAEVAGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVLQ", "middle": "+I+G++++ ++++ +NG ++++++++T+E ++++++ ++F++++++++ +++G++V+V+++++ R+W++ R++++I++ +++", "computed_K_ungapped": "0.1478", "computed_lambda_ungapped": "1.1810", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5936", "entropy": 0.2906, "expected_score": -0.2401, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9KH06|SSB_THEAQ Single-stranded DNA-binding protein OS=Thermus aquaticus OX=271 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 264, "target_eno": 9.0, "alignment": { "score": 46.43, "bit_score": 45.9, "evalue": 0.00018, "pvalue": 0.00018, "n_identities": 12, "n_positives": 63, "n_gaps": 16, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 132, "target_to": 225, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeee eeeeeeee hhhhhh eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-------YPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILMGNLTRDPDLRYT--PQGT-AVVRLGLAVNERRRGQEEERTHFLEVQAWRELAEWASELRKGDGLLVIGRLVNDSWTSSSGERRFQTRVEALRLE", "middle": "+++G++++ ++++ ++G+ ++++++L+++E ++++++++++++++++ ++++GD+++V+++++ ++W++ R++++++A+R+E", "computed_K_ungapped": "0.1318", "computed_lambda_ungapped": "1.0441", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5249", "entropy": 0.2227, "expected_score": -0.2070, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|C0SPB6|SSBB_BACSU Single-stranded DNA-binding protein B OS=Bacillus subtilis (strain 168) OX=224308 GN=ssbB PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 113, "target_eno": 12.0, "alignment": { "score": 39.47, "bit_score": 45.9, "evalue": 0.00018, "pvalue": 0.00018, "n_identities": 11, "n_positives": 59, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ--------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "MLVGRLTKDPDLRYTS--AG-AAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTVR", "middle": " ++G++++ ++++ + +G + ++++L +++ ++++++++++++++++ +Q+G++V+VS++I+ R++++ +++++++A++++", "computed_K_ungapped": "0.1265", "computed_lambda_ungapped": "1.0635", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5346", "entropy": 0.2148, "expected_score": -0.1999, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P28046|SSB_PROMI Single-stranded DNA-binding protein OS=Proteus mirabilis OX=584 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 174, "target_eno": 11.0, "alignment": { "score": 41.68, "bit_score": 45.8, "evalue": 0.0002, "pvalue": 0.0002, "n_identities": 11, "n_positives": 58, "n_gaps": 19, "aln_length": 98, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeeee eeeeeeee eeeeeee eeeeeeeeeeee eeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET---E---E---QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAW", "target_aln": "ILIGNLGQDPEIRYMPS--GGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVVVN", "middle": "+++G++++ ++++ +S G ++ + ++++ + + +++ ++++++FG++++++ ++++G++V+++++++ R+W+ G R+++++++ ", "computed_K_ungapped": "0.1422", "computed_lambda_ungapped": "1.1631", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5847", "entropy": 0.2769, "expected_score": -0.2332, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8K933|SSB_BUCAP Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 162, "target_eno": 11.0, "alignment": { "score": 42.93, "bit_score": 45.7, "evalue": 0.0002, "pvalue": 0.0002, "n_identities": 13, "n_positives": 64, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 111, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeeee eee eeeeeeeeee eeeeeee eeeeeeeeeeee eeeeeeeee eee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAW---RIE", "target_aln": "ILIGHLGQDPEVRYMPN--G-NAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQNGLERYTTEVIVNIGGTMQ", "middle": "+++G++++ +++++++ G ++++++L+T+E ++++++++++FG++++++ +++G++V++++++++R+W+ G R++++++++ +++", "computed_K_ungapped": "0.1262", "computed_lambda_ungapped": "1.0227", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5141", "entropy": 0.2151, "expected_score": -0.2092, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8KAM2|SSB2_CHLTE Single-stranded DNA-binding protein 2 OS=Chlorobaculum tepidum (strain ATCC 49652 \/ DSM 12025 \/ NBRC 103806 \/ TLS) OX=194439 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 10.0, "alignment": { "score": 42.19, "bit_score": 45.7, "evalue": 0.00021, "pvalue": 0.00021, "n_identities": 14, "n_positives": 58, "n_gaps": 19, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eee eeeeeeeeee eeeeeeee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY----------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IIAGNLTKDPVFRQT--NSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVGVVAWNKLAESCRDNLRKSSAVLVDGELQSRTWKAQDGTSRTVVEIKARRIQ", "middle": "+I+G++++ ++++ ++G+ ++ +F + +++++ ++++++++++++++ + N++++++V+V+++++ R+W++ R+ ++I+A+RI+", "computed_K_ungapped": "0.1301", "computed_lambda_ungapped": "1.0212", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5133", "entropy": 0.2193, "expected_score": -0.2067, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|O85824|SSB_THETH Single-stranded DNA-binding protein OS=Thermus thermophilus OX=274 GN=ssb PE=3 SV=3", "query_length": 84, "query_eno": 7.0, "target_length": 266, "target_eno": 9.0, "alignment": { "score": 44.95, "bit_score": 45.7, "evalue": 0.00021, "pvalue": 0.00021, "n_identities": 13, "n_positives": 60, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 132, "target_to": 224, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeeee hhhhhhh eeeeeeeeee eee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "FLMGNLTRDPELRYTP--QG-TAVARLGLAVNERRQGAEERTHFVEVQAWRDLAEWAAELRKGDGLFVIGRLVNDSWTSSSGERRFQTRVEALRLE", "middle": " ++G+++++ ++++ + +G ++++++L ++E + ++++++++++D+++ + ++++GD+++V+++++ ++W++ R++++++A+R+E", "computed_K_ungapped": "0.1350", "computed_lambda_ungapped": "1.0790", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5424", "entropy": 0.2353, "expected_score": -0.2127, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O66475|SSB_AQUAE Single-stranded DNA-binding protein OS=Aquifex aeolicus (strain VF5) OX=224324 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 147, "target_eno": 11.0, "alignment": { "score": 41.07, "bit_score": 45.5, "evalue": 0.00024, "pvalue": 0.00024, "n_identities": 13, "n_positives": 57, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 102, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeeee eeeeeee hhhhh eeeeeeeeee ee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWRIE", "target_aln": "FIIGRLTGDPVITYL--PSG-TPVVEFTLAYNRRYKNQNGEFQEESHFFDVKAYGKMAEDWATRFSKGYLVLVEGRLSQEKWEKEGKKFSKVRIIAENVR", "middle": " I+G++++ +++++ ++G ++EF+L++++ + +++++++++G++++ + +++G++V+V+++++ ++W++ ++ ++I+A +++", "computed_K_ungapped": "0.1315", "computed_lambda_ungapped": "1.0898", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5478", "entropy": 0.2425, "expected_score": -0.2143, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8RE26|SSB_FUSNN Single-stranded DNA-binding protein OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 \/ DSM 15643 \/ BCRC 10681 \/ CIP 101130 \/ JCM 8532 \/ KCTC 2640 \/ LMG 13131 \/ VPI 4355) OX=190304 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 154, "target_eno": 10.0, "alignment": { "score": 40.97, "bit_score": 45.4, "evalue": 0.00025, "pvalue": 0.00025, "n_identities": 11, "n_positives": 59, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeee eeeeeee eeeeeeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "VLNGRLTRDPELKFGQ--SG-KAYSRFSIAVDRPFQSSSDKNSQTADFINCVAFGKTAEFIGEYFRKGRKILLNGRLQMSQYESEGKKITTYVVIADSVE", "middle": " ++G++ ++ ++++G+ +G ++++F + ++++ +++I++++FG++++ + ++++G++++++++++ ++++ G ++ ++++A ++E", "computed_K_ungapped": "0.1337", "computed_lambda_ungapped": "1.0637", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5347", "entropy": 0.2317, "expected_score": -0.2115, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8XH44|SSB_CLOPE Single-stranded DNA-binding protein OS=Clostridium perfringens (strain 13 \/ Type A) OX=195102 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 150, "target_eno": 11.0, "alignment": { "score": 42.31, "bit_score": 45.4, "evalue": 0.00026, "pvalue": 0.00026, "n_identities": 13, "n_positives": 61, "n_gaps": 13, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeeeee eeeeeee eeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLIGRLTKDPELRFAAG-SG-TAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQYITKGRQLAVSGNIRTGSYEAQDGTRRYTTDVVVESFD", "middle": "+++G++++ ++++ ++ +G ++++F+L++++ + +++I++++FG++++++ I++G++++VS++I+ +++++ R+ +++++++++", "computed_K_ungapped": "0.1392", "computed_lambda_ungapped": "1.0480", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5268", "entropy": 0.2280, "expected_score": -0.2116, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P28044|SSB7_ECOLX Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 175, "target_eno": 9.0, "alignment": { "score": 41.69, "bit_score": 45.3, "evalue": 0.00027, "pvalue": 0.00027, "n_identities": 12, "n_positives": 58, "n_gaps": 20, "aln_length": 100, "query_from": 1, "query_to": 83, "target_from": 10, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eee eeeeeeeeee eeeeeee eee eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWRI", "target_aln": "ILVGRLGKDPEVRYIPN--G-GAVANLQVATSESWRDKQTGEIREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEILVKTT", "middle": " ++G++ + ++++ ++ G +++++++ T+E ++++++++++FG++++++ +++G++V ++++++ R+W++ R++++I+++++", "computed_K_ungapped": "0.1415", "computed_lambda_ungapped": "1.1186", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5623", "entropy": 0.2645, "expected_score": -0.2292, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P25762|SSB_SERMA Single-stranded DNA-binding protein OS=Serratia marcescens OX=615 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 176, "target_eno": 10.5, "alignment": { "score": 41.19, "bit_score": 45.3, "evalue": 0.00027, "pvalue": 0.00027, "n_identities": 15, "n_positives": 55, "n_gaps": 21, "aln_length": 99, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeeeee eeeeeeee hhhhhhh eeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAW", "target_aln": "ILVGNLGQDPEVRY--MPNG-GAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQSGQDRYTTEIVVN", "middle": "+++G++ + ++++ ++NG ++++++L+T+E ++++++++++FG++++++ +++G++V+++++++ R+W+ G R+ ++I++ ", "computed_K_ungapped": "0.1448", "computed_lambda_ungapped": "1.1899", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5981", "entropy": 0.2940, "expected_score": -0.2390, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q72UU3|SSB_LEPIC Single-stranded DNA-binding protein OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 117, "target_eno": 12.0, "alignment": { "score": 40.60, "bit_score": 45.3, "evalue": 0.00027, "pvalue": 0.00027, "n_identities": 11, "n_positives": 63, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeeee eeeeeeee hhhhhh eeeeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILDGNLTSD--PEIKTLNSG-KSVATFTLAVNHDYKSTLEEPGEVSFVEIELWDRQAVNAHEYLKKGKKATVIGELRQDRWKAQDGSNRSKLKVVGQMIR", "middle": "+++G++ + ++ +T+++G ++ +F+L+++++ ++++++E+++++++++ ++++G++++V+++++ ++W++ R+++++++++I+", "computed_K_ungapped": "0.1315", "computed_lambda_ungapped": "1.0396", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5226", "entropy": 0.2102, "expected_score": -0.2021, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9CGS5|SSB1_LACLA Single-stranded DNA-binding protein 1 OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 150, "target_eno": 11.0, "alignment": { "score": 41.09, "bit_score": 45.3, "evalue": 0.00028, "pvalue": 0.00028, "n_identities": 9, "n_positives": 61, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeee eeeeeeeeehhhhhhhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTRDPELRHTPQ--N-QAVGTFGLAVNRQFKNANGEREADFINCVIWRQQAENLAKFAKKGALIGITGRIQTRNYENQQGQKVYVTEVVADTFQ", "middle": "+++G++++ ++++ ++ + ++++F+L++++ + + +I++++++++ + L +++G++++++++I++R++++ ++ ++++A +++", "computed_K_ungapped": "0.1473", "computed_lambda_ungapped": "1.1361", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5711", "entropy": 0.2581, "expected_score": -0.2223, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8DIU1|SSB_THEVB Single-stranded DNA-binding protein OS=Thermosynechococcus vestitus (strain IAM M-273 \/ NIES-2133 \/ BP-1) OX=197221 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 120, "target_eno": 12.0, "alignment": { "score": 39.54, "bit_score": 45.2, "evalue": 0.00029, "pvalue": 0.00029, "n_identities": 12, "n_positives": 60, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeeee eeeeee eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "HLVGRVGGDPEVRYF--ESG-SVKCRLTLAVNRPSKDDQPDWFNLEIWGKTAQVAADYVRKGTLLGIKGSLKFDRWQDRNTGVDRSSPIILVERMD", "middle": "+++G++++ ++++ ++G +K++++L +++ + P+++++E++G++++++ ++++G++++++++++ ++W++ R+ ++I++ R++", "computed_K_ungapped": "0.1363", "computed_lambda_ungapped": "1.0667", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5362", "entropy": 0.2309, "expected_score": -0.2138, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "1SE8_A Single-strand binding protein; Single-strand binding protein, DNA BINDING PROTEIN; HET: MSE; 1.8A {Deinococcus radiodurans} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 301, "target_eno": 9.0, "alignment": { "score": 45.15, "bit_score": 45.2, "evalue": 0.00029, "pvalue": 0.00029, "n_identities": 13, "n_positives": 64, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 133, "target_to": 229, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeeee eeeeeeeee hhhhhh eeeeeeeeee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "LVLGNVTRDPEIRYTP--AG-DAVLSLSIAVNENYQDRQGQRQEKVHYIDATLWRDLAENMKELRKGDPVMIMGRLVNEGWTDKDGNKRNSTRVEATRVE", "middle": " ++G++++ ++++++ +G +++++++++++E + +++I++++++D+++++ ++++GD+V++++++++++W++ R++++++A+R+E", "computed_K_ungapped": "0.1368", "computed_lambda_ungapped": "1.1410", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5735", "entropy": 0.2458, "expected_score": -0.2110, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3K7U_C MP18 RNA editing complex protein; RNA-editing, OB-fold, RNA-editing proteins, kinetoplastids, Immune System, RNA Binding Protein; 2.1A {Lama glama}", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 12.0, "alignment": { "score": 40.20, "bit_score": 45.2, "evalue": 0.00031, "pvalue": 0.00031, "n_identities": 12, "n_positives": 58, "n_gaps": 24, "aln_length": 100, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeeee eeee eeeeeeeeee eeeeeeeeeeeee hhhhhhh eeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKI-DLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "TLVGVVH---DIQSGFVY-E-DAVTQFTLTTTSIDTTHPTQEVVVEKDHHTIRCFGELFSAEVKQKVKEGNVVCVNGRLRLSPQLEPSCNKHFYFPYIQV", "middle": "+++G+++ ++QSG+++ + ++ +F+L+T++ + ++++++++FG+ + + ++++G++V+V+++++++++++ +++++++++", "computed_K_ungapped": "0.1371", "computed_lambda_ungapped": "1.1677", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5870", "entropy": 0.2671, "expected_score": -0.2211, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q97KH4|SSB1_CLOAB Single-stranded DNA-binding protein 1 OS=Clostridium acetobutylicum (strain ATCC 824 \/ DSM 792 \/ JCM 1419 \/ LMG 5710 \/ VKM B-1787) OX=272562 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 110, "target_eno": 12.0, "alignment": { "score": 39.64, "bit_score": 45.1, "evalue": 0.00033, "pvalue": 0.00033, "n_identities": 10, "n_positives": 61, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeeeeeee eeeeeee hhhhh eeeeeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "LLIGRMTKNPSIKQIET-TGNNR--CNFTIAVNRRVRNTNGENEADFIPVTVWGKTAENVARYMKKGYLVGVSGRLQVRTYQDVDGNRKYITEVVGEEVQ", "middle": "+++G++++ +++++++ +G ++ +F +++++ +++I+++++G++++++ +++G++V+VS++++ R++++ ++ +++++ +++", "computed_K_ungapped": "0.1203", "computed_lambda_ungapped": "0.9925", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4989", "entropy": 0.1954, "expected_score": -0.1954, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "2FXQ_A Single-strand binding protein; 5 strand beta-sheet extended loops, DNA BINDING PROTEIN; 1.85A {Thermus aquaticus} SCOP: b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 264, "target_eno": 10.0, "alignment": { "score": 44.44, "bit_score": 45.0, "evalue": 0.00034, "pvalue": 0.00034, "n_identities": 12, "n_positives": 62, "n_gaps": 16, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 132, "target_to": 225, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeee eeeeeeeeee eeeeeeeee hhhhhhh eeeeeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-------EQYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILMGNLTRDPDLR--YTPQG-TAVVRLGLAVNERRRGQEEERTHFLEVQAWRELAEWASELRKGDGLLVIGRLVNDSWTSSSGERRFQTRVEALRLE", "middle": " ++G++ + +++ ++++G ++++++L+++ E+++ ++++++++++++++ ++++GD+++V+++++ ++W++ R++++++A+R+E", "computed_K_ungapped": "0.1337", "computed_lambda_ungapped": "1.0949", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5504", "entropy": 0.2310, "expected_score": -0.2068, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "1Z9F_A Single-strand binding protein; TM0604, single stranded DNA-binding protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative; 2.3A {Thermotoga maritima} SCOP: l.1.1.1, b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 153, "target_eno": 12.0, "alignment": { "score": 40.16, "bit_score": 44.9, "evalue": 0.00038, "pvalue": 0.00038, "n_identities": 13, "n_positives": 54, "n_gaps": 18, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 20, "target_to": 117, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeee hhhhhhhh eeeeeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGRLVRDPEERYT--LSGTPVTTFTIAVDRVPRKNAPDDAQTTDFFRIVTFGRLAEFARTYLTKGRLVLVEGEMRMRRWETPTGEKRVSPEVVANVVR", "middle": " ++G++++ +E++ ++G ++ + +++++ Q ++++++++FG++++ + +++G++V+V+++++ R+W++ R+ ++++A +++", "computed_K_ungapped": "0.1477", "computed_lambda_ungapped": "1.2103", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6084", "entropy": 0.2941, "expected_score": -0.2353, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P09381|SSBPB_XENLA Single-stranded DNA-binding protein 1-B, mitochondrial OS=Xenopus laevis OX=8355 GN=ssbp1-b PE=1 SV=4", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 11.0, "alignment": { "score": 38.98, "bit_score": 44.8, "evalue": 0.00038, "pvalue": 0.00038, "n_identities": 16, "n_positives": 56, "n_gaps": 28, "aln_length": 109, "query_from": 1, "query_to": 84, "target_from": 34, "target_to": 139, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeee eeeeeeee ee eeeeeee hhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "QLLGRVGQDPVMRQA--DGK-NPVTIFSLATNELWRSGENEVFQPAGDVNQKTTWHRVSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTDKNNVRRQATTIIADNII", "middle": "+++G++++ ++++ +++ ++ +F+L+T+E Q + ++++++F++ +D + ++++G++++V+++I+++E+++ R++++I+A++I+", "computed_K_ungapped": "0.1443", "computed_lambda_ungapped": "1.2675", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6371", "entropy": 0.3040, "expected_score": -0.2247, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P44409|SSB_HAEIN Single-stranded DNA-binding protein OS=Haemophilus influenzae (strain ATCC 51907 \/ DSM 11121 \/ KW20 \/ Rd) OX=71421 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 168, "target_eno": 11.0, "alignment": { "score": 41.48, "bit_score": 44.8, "evalue": 0.0004, "pvalue": 0.0004, "n_identities": 15, "n_positives": 59, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee e eeeeeeeeee eeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IIVGHLGNDPEIR--TMPNG-DAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQ", "middle": "+I+G++++ +++ T++NG +++++++ T+E + +++++++F++++++++ +++G++V+V+++++ R+W++ R++++I++++++", "computed_K_ungapped": "0.1429", "computed_lambda_ungapped": "1.1195", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5627", "entropy": 0.2618, "expected_score": -0.2305, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "4GS3_A Single-stranded DNA-binding protein; primosome, oligonucleotide\/oligosaccharide binding domain, DNA BINDING PROTEIN; 1.09A {Thermoanaerobacter tengcongensis}", "query_length": 84, "query_eno": 7.0, "target_length": 107, "target_eno": 12.0, "alignment": { "score": 38.23, "bit_score": 44.7, "evalue": 0.00042, "pvalue": 0.00042, "n_identities": 11, "n_positives": 61, "n_gaps": 9, "aln_length": 91, "query_from": 1, "query_to": 84, "target_from": 15, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeee eeeeeeee eeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "TLVGKVFTPLEFSHEL--YGEKFFNFILEVPRLSETKDYLPITISNRLFEGMNLEVGTRVKIEGQLRSYNRKSPEEGKNKLILTVFARDIS", "middle": " ++GK+++ L++++ + +G ++ + +++++++++ + ++++++++++ +++N++VG++VK++++++ +++++ +++++++A +I+", "computed_K_ungapped": "0.1312", "computed_lambda_ungapped": "1.0637", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5347", "entropy": 0.2094, "expected_score": -0.1956, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q839Y9|SSB_ENTFA Single-stranded DNA-binding protein OS=Enterococcus faecalis (strain ATCC 700802 \/ V583) OX=226185 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 188, "target_eno": 9.0, "alignment": { "score": 41.32, "bit_score": 44.6, "evalue": 0.00046, "pvalue": 0.00046, "n_identities": 10, "n_positives": 60, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee hhhhhhh eeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPDLRYTAS--G-SAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTRNYENQQGQRVYVTEVVCENFQ", "middle": " ++G++++ ++++ +S G ++++F+L +++++ + +I+++++++ ++++ +++G++++V+++I+ R++++ ++ +++++++++", "computed_K_ungapped": "0.1472", "computed_lambda_ungapped": "1.1065", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5562", "entropy": 0.2753, "expected_score": -0.2474, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A1AJA6|PRIB_ECOK1 Primosomal replication protein N OS=Escherichia coli O1:K1 \/ APEC OX=405955 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 104, "target_eno": 12.0, "alignment": { "score": 39.97, "bit_score": 44.5, "evalue": 0.00047, "pvalue": 0.00047, "n_identities": 17, "n_positives": 52, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeeeee ee eeeeeeee eeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTVCRTPLRKVSPS--G-IPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIE", "middle": " ++G+++++ ++++ +S G ++ +FVLE+++ + + +++++++G+ ++++ I+VG++++V+++I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1246", "computed_lambda_ungapped": "0.9439", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4745", "entropy": 0.1894, "expected_score": -0.2015, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein OS=Deinococcus radiodurans (strain ATCC 13939 \/ DSM 20539 \/ JCM 16871 \/ LMG 4051 \/ NBRC 15346 \/ NCIMB 9279 \/ R1 \/ VKM B-1422) OX=243230 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 301, "target_eno": 9.0, "alignment": { "score": 44.36, "bit_score": 44.5, "evalue": 0.00047, "pvalue": 0.00047, "n_identities": 14, "n_positives": 61, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 133, "target_to": 229, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee ee eeeeeee hhhh eeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY----------PKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "LVLGNVTRDPEIRYT--PAG-DAVLSLSIAVNENYQDRQGQRQEKVHYIDATLWRDLAENMKELRKGDPVMIMGRLVNEGWTDKDGNKRNSTRVEATRVE", "middle": "+++G++++ ++++ ++G +++++++ ++E+Y +++I++++++D+++++ ++++GD+V++++++++++W++ R+ ++++A+R+E", "computed_K_ungapped": "0.1350", "computed_lambda_ungapped": "1.1070", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5565", "entropy": 0.2589, "expected_score": -0.2273, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q4UJW3|SSB_RICFE Single-stranded DNA-binding protein OS=Rickettsia felis (strain ATCC VR-1525 \/ URRWXCal2) OX=315456 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 152, "target_eno": 10.0, "alignment": { "score": 40.04, "bit_score": 44.5, "evalue": 0.00049, "pvalue": 0.00049, "n_identities": 11, "n_positives": 60, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee ee eeeeeeeeee eeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILIGNVGRDPEIRT--TGEG-KKIINLSLATTETWKDRITSERKERTEWHRVVIFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDNSGQEKYTTEVVLQNF", "middle": "+++G++++ ++++ +++G K+ +++L+T+E+ ++++++++F++ + +++ +++G++++++++++ R+WN+ ++ ++++++++", "computed_K_ungapped": "0.1337", "computed_lambda_ungapped": "1.0714", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5386", "entropy": 0.2330, "expected_score": -0.2097, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A8FR96|PRIB_SHESH Primosomal replication protein N OS=Shewanella sediminis (strain HAW-EB3) OX=425104 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 101, "target_eno": 12.0, "alignment": { "score": 38.42, "bit_score": 44.4, "evalue": 0.00052, "pvalue": 0.00052, "n_identities": 15, "n_positives": 56, "n_gaps": 16, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee e eeeeeeeeee eeeeee eeeeeeee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTITRSRSF---KSPAG-IAHSVIMLEHKSQCFEAEMLRNVYCQMQVIFSGERFESVTEQLKSGVDIEVQGFIALQQSRNGQNRLVLHAENVE", "middle": " ++G+I++ ++ +S++G ++++++LE+++Q+ ++++ ++F+G++ +++ ++++G++++V+++I+ ++++ G++ ++++A ++E", "computed_K_ungapped": "0.1309", "computed_lambda_ungapped": "0.9715", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.4883", "entropy": 0.1924, "expected_score": -0.1985, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P59932|SSB_RHOBA Single-stranded DNA-binding protein OS=Rhodopirellula baltica (strain DSM 10527 \/ NCIMB 13988 \/ SH1) OX=243090 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 169, "target_eno": 10.0, "alignment": { "score": 40.83, "bit_score": 44.3, "evalue": 0.00056, "pvalue": 0.00056, "n_identities": 12, "n_positives": 58, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee eeeeeeeeee ee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-------E---QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "MLMGNLTRDIELRYLP--SG-MAVAEFSIAVNEKRKASDGQWVEDVSFFEITLFGRTAEVASEYLSKGSPIFVEGRLKQDTWEKDGQKRSKVKVIGERMQ", "middle": "+++G++++ ++++ + +G +++EF++ ++ + + ++++++++FG+ ++++ +++G++++V+++++ ++W+ G R+ +++++ R++", "computed_K_ungapped": "0.1514", "computed_lambda_ungapped": "1.1154", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5607", "entropy": 0.2786, "expected_score": -0.2469, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P51237|YCF41_PORPU Putative single-stranded DNA-binding protein ycf41 OS=Porphyra purpurea OX=2787 GN=ycf41 PE=4 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 111, "target_eno": 12.0, "alignment": { "score": 38.73, "bit_score": 44.0, "evalue": 0.00066, "pvalue": 0.00066, "n_identities": 7, "n_positives": 65, "n_gaps": 13, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 95, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeeeeeeeee eeeeeeeeee eeeeeeeee hhhhh eeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-------RWFNSIRAWRIE", "target_aln": "NLLVQILQCKSVKTTS--NE-NQIIKLKARFKKRNKVVAIDLLIWNRQSLEIFKLLKKFDYIIIEGKLHRSETTDIKLMLNQQKDLVFSTSRIF", "middle": " ++++I++ ++++++ N+ ++++++++++ ++ +++I++++++++++++ ++++D+++++++++ +E+++ ++ +++++ RI+", "computed_K_ungapped": "0.1224", "computed_lambda_ungapped": "0.9668", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4860", "entropy": 0.1836, "expected_score": -0.1879, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P0AGE0|SSB_ECOLI Single-stranded DNA-binding protein OS=Escherichia coli (strain K12) OX=83333 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 178, "target_eno": 11.0, "alignment": { "score": 40.15, "bit_score": 44.0, "evalue": 0.00067, "pvalue": 0.00067, "n_identities": 14, "n_positives": 56, "n_gaps": 21, "aln_length": 99, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee ee eeeeeeeee eeeeeee hhhh eeeeeeeeeee eeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAW", "target_aln": "ILVGNLGQDPEVRYM--PNG-GAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVN", "middle": "+++G++ + ++++ +NG ++++++L+T+E+ ++++++++FG++++++ ++++G++V+++++++ R+W+ G R+++++++ ", "computed_K_ungapped": "0.1458", "computed_lambda_ungapped": "1.1827", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5945", "entropy": 0.3027, "expected_score": -0.2468, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3A5U_A Single-stranded DNA-binding protein; DNA binding protein, DNA damage, DNA repair, DNA replication, DNA-binding; 2.8A {Mycobacterium smegmatis} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 130, "target_eno": 12.0, "alignment": { "score": 39.03, "bit_score": 44.0, "evalue": 0.00068, "pvalue": 0.00068, "n_identities": 10, "n_positives": 60, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeeee hhhh eeeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVVGNLTADP--ELRFTPSG-AAVANFTVASTPRMFDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEIG", "middle": " ++G+++A + ++++G ++ +F+++++++ + ++++++++++ +++ + +++G++V+V+++++ R++++ R+++++++++I+", "computed_K_ungapped": "0.1288", "computed_lambda_ungapped": "1.0586", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5321", "entropy": 0.2067, "expected_score": -0.1952, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9WZ73|SSB_THEMA Single-stranded DNA-binding protein OS=Thermotoga maritima (strain ATCC 43589 \/ DSM 3109 \/ JCM 10099 \/ NBRC 100826 \/ MSB8) OX=243274 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 141, "target_eno": 11.0, "alignment": { "score": 39.50, "bit_score": 44.0, "evalue": 0.00071, "pvalue": 0.00071, "n_identities": 14, "n_positives": 56, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeee eeeeeee hhhhhhhee eeeeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGRLVRDPEERYTL--SG-TPVTTFTIAVDRVPRKNAPDDAQTTDFFRIVTFGRLAEFARTYLTKGRLVLVEGEMRMRRWETPTGEKRVSPEVVANVVR", "middle": " ++G++++ +E++++ +G ++++F++++++ Q ++++++++FG++++ + +++G++V+V++ ++ R+W++ R+ ++++A +++", "computed_K_ungapped": "0.1379", "computed_lambda_ungapped": "1.1098", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5579", "entropy": 0.2393, "expected_score": -0.2098, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q89A53|SSB_BUCBP Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 11.0, "alignment": { "score": 40.55, "bit_score": 43.9, "evalue": 0.00075, "pvalue": 0.00075, "n_identities": 13, "n_positives": 60, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 111, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeee eeeeeeeee eee eeeeeee eeeeeeeeee eeeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----E------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILIGYLGQDPDVRYM--QNG-SAVTNITLATSETWKDKNNGEIKEKTEWHRIVFFNKLAEIAGEYLKKGSQVYIEGSLQTRKWKDQNGIERYITEIIVSVGGTMQ", "middle": " ++G++++ +++++ +NG + +++L T+ + +++++++++FF+++++++ +++G++V++++++++R+W++ R++++I+++ +++", "computed_K_ungapped": "0.1432", "computed_lambda_ungapped": "1.1207", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5633", "entropy": 0.2556, "expected_score": -0.2302, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q6G7V6|SSB1_STAAS Single-stranded DNA-binding protein 1 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 156, "target_eno": 11.0, "alignment": { "score": 39.90, "bit_score": 43.8, "evalue": 0.00076, "pvalue": 0.00076, "n_identities": 12, "n_positives": 58, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeee eeeeeee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGRLTRDPELRTTQS--G-VNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQ", "middle": " ++G++++ ++++ +S G + ++F+L++++ + +++I++++F+++++ + +++G++++V+++++ R++++ +++++++A +I+", "computed_K_ungapped": "0.1448", "computed_lambda_ungapped": "1.1324", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5692", "entropy": 0.2664, "expected_score": -0.2285, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P59927|SSB_CUPNH Single-stranded DNA-binding protein OS=Cupriavidus necator (strain ATCC 17699 \/ DSM 428 \/ KCTC 22496 \/ NCIMB 10442 \/ H16 \/ Stanier 337) OX=381666 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 188, "target_eno": 10.0, "alignment": { "score": 40.30, "bit_score": 43.8, "evalue": 0.00078, "pvalue": 0.00078, "n_identities": 13, "n_positives": 57, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeee eeeeeeee eeeeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGNLGADPEVRYM--PSG-DAVANLRIATTDRYKDKQSGEMKEATEWHRVSMFGKLAEIAGQYLRKGSSVYIEGRIRTRKWQDQSGQDKYSTEIVADQMQ", "middle": " ++G++ A ++++ ++G +++++++ T++ ++++++ +++FG++++++ +++G++V+++++I+ R+W++ ++ ++I+A++++", "computed_K_ungapped": "0.1408", "computed_lambda_ungapped": "1.2004", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6034", "entropy": 0.2993, "expected_score": -0.2347, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9Z8F7|SSB_CHLPN Single-stranded DNA-binding protein OS=Chlamydia pneumoniae OX=83558 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 160, "target_eno": 10.0, "alignment": { "score": 39.99, "bit_score": 43.7, "evalue": 0.00081, "pvalue": 0.00081, "n_identities": 12, "n_positives": 59, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeee eeee eeeeeeeeeee eeeeeee eeeeeeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLET-----EEQYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWN---G--RWFNSIRAWRIE", "target_aln": "HFAGYLGA--DPEERMTSKG-KRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLK", "middle": " ++G++ A ++++ +++G ++ +++L + +++ +++++++++++++D++ + +++G++V+V++DI+ ++++ G ++ ++I++++++", "computed_K_ungapped": "0.1423", "computed_lambda_ungapped": "1.0784", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5421", "entropy": 0.2588, "expected_score": -0.2403, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P57610|SSB_BUCAI Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 171, "target_eno": 11.0, "alignment": { "score": 40.50, "bit_score": 43.7, "evalue": 0.00083, "pvalue": 0.00083, "n_identities": 11, "n_positives": 61, "n_gaps": 22, "aln_length": 104, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 111, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeeeee eeeeeeeeeee eeeeeee hhhhhh eeeeeeeeee eeeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET---E---E---QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILIGHLGQDPEVRYM--PNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQNGLERYTTEIIVNIGGTMQ", "middle": " ++G++++ ++++ +NG ++ + +++++ + + + ++++++++FG++++++ +++G++V+++++++ R+W++ R++++I+++ +++", "computed_K_ungapped": "0.1376", "computed_lambda_ungapped": "1.1091", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5575", "entropy": 0.2494, "expected_score": -0.2243, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A8H8L1|PRIB_SHEPA Primosomal replication protein N OS=Shewanella pealeana (strain ATCC 700345 \/ ANG-SQ1) OX=398579 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 101, "target_eno": 12.0, "alignment": { "score": 38.96, "bit_score": 43.7, "evalue": 0.00085, "pvalue": 0.00085, "n_identities": 17, "n_positives": 52, "n_gaps": 16, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee e e eeeeeeeeeee eeeeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLAGTITRSRQ---FDSPAG-IAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGERFNGVAKNLTAGVEIQVEGFINLQQSRNGQNRLVLHAENVE", "middle": " ++G+I + + ++S++G ++ +++LE+++Q +++I+++++G++ +++ N+++G+E++V+++I+ ++++ G++ ++++A ++E", "computed_K_ungapped": "0.1205", "computed_lambda_ungapped": "0.9490", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4770", "entropy": 0.1937, "expected_score": -0.2060, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q847G1|SSB1_PSEPU Single-stranded DNA-binding protein OS=Pseudomonas putida OX=303 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 161, "target_eno": 11.0, "alignment": { "score": 39.83, "bit_score": 43.7, "evalue": 0.00086, "pvalue": 0.00086, "n_identities": 14, "n_positives": 56, "n_gaps": 20, "aln_length": 99, "query_from": 1, "query_to": 82, "target_from": 9, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee eee eeeeeeee ee eeeeeee eeeeeeeeee ee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWR", "target_aln": "ILIGTCGQDPEVRYLPN--GN-AVTNLSLATSEQWTDKQTGQKVEKTERHRVSLFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVDM", "middle": "+++G++ + ++++ ++ G+ +++++L T+E + ++++++++FG++++++ ++++G++V+++++++ REW++ R++++I++ +", "computed_K_ungapped": "0.1423", "computed_lambda_ungapped": "1.0876", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5467", "entropy": 0.2483, "expected_score": -0.2276, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8ZJ06|SSB_YERPE Single-stranded DNA-binding protein OS=Yersinia pestis OX=632 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 182, "target_eno": 10.0, "alignment": { "score": 39.66, "bit_score": 43.7, "evalue": 0.00086, "pvalue": 0.00086, "n_identities": 12, "n_positives": 57, "n_gaps": 21, "aln_length": 99, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeeeee eeeeeee hh eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "ILVGNLGQDPEVRYMPN--G-GAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGALQTRKWQDQSGQERYTTEVVVN", "middle": "+++G++ + +++++++ G + +++L+T+E ++++++ +++FG++++++ +++G++V+++++++ R+W++ R++++++++", "computed_K_ungapped": "0.1450", "computed_lambda_ungapped": "1.1963", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6013", "entropy": 0.2946, "expected_score": -0.2397, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q7MYU8|PRIB_PHOLL Primosomal replication protein N OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 \/ CIP 105565 \/ TT01) OX=243265 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 105, "target_eno": 12.0, "alignment": { "score": 38.12, "bit_score": 43.6, "evalue": 0.00089, "pvalue": 0.00089, "n_identities": 20, "n_positives": 50, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeeee ee eeeeee eeeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTVCKVPIRK--VSPAG-IPHCQFVLEHRSQQQEAGLSRQAWCRMPVIASGQLLQVLTHSITVGSRLTVSGFISCHQGRNGLNKLVLHAEQIE", "middle": " ++G++++ +++ +S++G ++++FVLE+++Q + +++++++G+++++L I+VG++++VS +I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1243", "computed_lambda_ungapped": "0.9619", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4835", "entropy": 0.1929, "expected_score": -0.1999, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8EA81|SSB_SHEON Single-stranded DNA-binding protein OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 238, "target_eno": 3.5, "alignment": { "score": 37.84, "bit_score": 43.4, "evalue": 0.001, "pvalue": 0.001, "n_identities": 11, "n_positives": 58, "n_gaps": 20, "aln_length": 99, "query_from": 1, "query_to": 82, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeeeee eeeeeeeee eeeeeeee eee eeeeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWR", "target_aln": "ILVGNLGQDPEVRYMPN--G-NAVANITVATSESWKDQQGQQQERTEWHRVVLFGKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQ", "middle": "+++G++++ ++++ ++ G ++ +++++T+E + ++++++++FG+ ++++ +++G++V++++++++R+W++ R+ +++++ +", "computed_K_ungapped": "0.1597", "computed_lambda_ungapped": "1.3091", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6580", "entropy": 0.3807, "expected_score": -0.2603, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8DSD8|SSB_STRMU Single-stranded DNA-binding protein OS=Streptococcus mutans serotype c (strain ATCC 700610 \/ UA159) OX=210007 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 164, "target_eno": 10.0, "alignment": { "score": 39.85, "bit_score": 43.4, "evalue": 0.001, "pvalue": 0.001, "n_identities": 9, "n_positives": 59, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeee hhhhhhhhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRMTRDAELRYT--PSN-QAVATFTLAVNRNFKNQNGEREADFINIVIWRQQAENLANWAKKGTLLGITGRIQTRNYENQQGQRVYVTEVVADNFQ", "middle": " ++G++++ ++++ +++ ++ +F+L +++ + +++I+++++++ +++L +++G++++++++I+ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1475", "computed_lambda_ungapped": "1.1097", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5578", "entropy": 0.2607, "expected_score": -0.2303, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8CNK0|SSB_STAES Single-stranded DNA-binding protein OS=Staphylococcus epidermidis (strain ATCC 12228 \/ FDA PCI 1200) OX=176280 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 131, "target_eno": 11.0, "alignment": { "score": 39.29, "bit_score": 43.4, "evalue": 0.001, "pvalue": 0.001, "n_identities": 13, "n_positives": 60, "n_gaps": 18, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeeeee eeeeeee eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ--------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "VIVGRMTKDAQIYE--K-ED-NKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRKYEKEGQTHFVTELYVETIK", "middle": "+I+G+++++ ++++ + ++ K+ +F++ TE++ +++++++++FG++++++ +++G++V+++++++ R+++ G ++++++++ +I+", "computed_K_ungapped": "0.1303", "computed_lambda_ungapped": "1.0351", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5203", "entropy": 0.2130, "expected_score": -0.2020, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q93GP7|SSB2_SALTY Single-stranded DNA-binding protein 2 OS=Salmonella typhimurium (strain LT2 \/ SGSC1412 \/ ATCC 700720) OX=99287 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 172, "target_eno": 10.0, "alignment": { "score": 39.95, "bit_score": 43.4, "evalue": 0.0011, "pvalue": 0.0011, "n_identities": 13, "n_positives": 56, "n_gaps": 21, "aln_length": 99, "query_from": 1, "query_to": 81, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeee eeeeeee eeeeeeeeeeee eeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "ILVGHIGQDPEVRYMP--NG-GAVANLTLATSETWRVRQDGEMREHTEWHRVVVFGKLAEIASEYLRKGAQVYIEGQLRTRKWTDQSGQDKYTTEVIVN", "middle": " ++G+I + ++++++ NG ++ +++L+T+E ++++++++++FG++++++ +++G++V++++++++R+W++ ++ +++++ ", "computed_K_ungapped": "0.1378", "computed_lambda_ungapped": "1.1417", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5739", "entropy": 0.2733, "expected_score": -0.2325, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8KB47|SSB1_CHLTE Single-stranded DNA-binding protein 1 OS=Chlorobaculum tepidum (strain ATCC 49652 \/ DSM 12025 \/ NBRC 103806 \/ TLS) OX=194439 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 162, "target_eno": 10.0, "alignment": { "score": 39.27, "bit_score": 43.3, "evalue": 0.0011, "pvalue": 0.0011, "n_identities": 14, "n_positives": 58, "n_gaps": 21, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeeee eeeeeee eeeeeee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "MLIGHLGNDPERRETAS--G-QSVVNFTLATSEGFKDSSGNLQERTEWHRIVAWGKLADICSQYLKKGRQVYIEGRLQTRSWDDNKTGDKKYATEIVCTDMQ", "middle": "+++G++++ ++++++S G ++ +F+L T+E + +++++++++G+++D++ +++G++V+++++++ R+W++ +++++I++ +++", "computed_K_ungapped": "0.1378", "computed_lambda_ungapped": "1.1178", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5619", "entropy": 0.2588, "expected_score": -0.2178, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P0DF76|SSB_STRP3 Single-stranded DNA-binding protein OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 \/ MGAS315) OX=198466 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 163, "target_eno": 10.0, "alignment": { "score": 39.63, "bit_score": 43.3, "evalue": 0.0011, "pvalue": 0.0011, "n_identities": 10, "n_positives": 61, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeee eeeeeeee hh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRMTKDAELRY--TPSQ-VAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNFQ", "middle": " ++G++++ ++++ ++++ ++ +F+L++++ + +++I+++++++++++L +++G++++V+++I+ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1391", "computed_lambda_ungapped": "1.1084", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5572", "entropy": 0.2522, "expected_score": -0.2261, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "2VW9_B SINGLE-STRANDED DNA BINDING PROTEIN; DNA REPLICATION, SINGLE-STRANDED DNA, SINGLE-STRANDED DNA BINDING PROTEIN, OLIGONUCLEOTIDE\/OLIGOSACCHARIDE BINDING FOLD, HELICOBACTER PYLORI, OB-FOLD, DNA DAMAGE; 2.3A {HELICOBACTER PYLORI} SCOP: b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 134, "target_eno": 12.0, "alignment": { "score": 38.52, "bit_score": 43.3, "evalue": 0.0011, "pvalue": 0.0011, "n_identities": 13, "n_positives": 59, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeee eeeeeeee eeeeeeeeee hhhhh eeeeeeeeeeeeee eeeeeee eee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IMVGRLTRNVELKYLPS--G-SAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQ", "middle": " ++G++++ ++++++S G + ++++L+T++ + + +I++++FG++++++ +++G++V+++++++ ++W++ +++++I+A++++", "computed_K_ungapped": "0.1317", "computed_lambda_ungapped": "1.1378", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5720", "entropy": 0.2297, "expected_score": -0.2006, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "6CQO_E Single-stranded DNA-binding protein RIM1, mitochondrial; Mitochondrial single-stranded DNA binding proteins, Rim1, S. cerevisiae, DNA BINDING PROTEIN; HET: MSE; 2.8A {Saccharomyces cerevisiae}", "query_length": 84, "query_eno": 7.0, "target_length": 119, "target_eno": 12.0, "alignment": { "score": 38.59, "bit_score": 43.2, "evalue": 0.0012, "pvalue": 0.0012, "n_identities": 15, "n_positives": 53, "n_gaps": 14, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeeeee ee eeeeeeeee eeeeeeeee eee eeeeeeeeeeeeee eeeeeee eee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---QYPKKICFEFFGD-KIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "SIVGRIGSEF--TEHTSANN-NRYLKYSIASQPRRDGQTNWYNITVFNEPQINFLTEYVRKGALVYVEADAANYVFERDDGSKGTTLSLVQKDIN", "middle": " I+G+I + ++ TS+N+ + ++++ +++ + ++++++++F++ I++L + +++G++V+V+ D++++++++ ++ +S+++++I+", "computed_K_ungapped": "0.1245", "computed_lambda_ungapped": "1.0208", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5132", "entropy": 0.1944, "expected_score": -0.1908, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q7MH89|PRIB_VIBVY Primosomal replication protein N OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 100, "target_eno": 12.0, "alignment": { "score": 38.42, "bit_score": 43.2, "evalue": 0.0012, "pvalue": 0.0012, "n_identities": 15, "n_positives": 54, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeeeee eeeeeee eeee eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-RWFNSIRAWRIE", "target_aln": "ELSGTVVKDPIRSQSP--AG-ISHCRFWLEHRSVVVEADLPRQVFCRMPVVVSGKGSQDITQQIVLGSNIKVSGFVAYQTGRNGVGKLVLHADDII", "middle": "E++G++++ ++++ + +G ++ +F+LE+++ Q +++++++++G+ ++++ I++G+++KVS +++ +++++ ++ ++++A +I+", "computed_K_ungapped": "0.1188", "computed_lambda_ungapped": "0.9114", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4581", "entropy": 0.1791, "expected_score": -0.1974, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3KLW_B Primosomal replication protein n; STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, DNA REPLICATION, DNA-BINDING, PRIMOSOME, DNA; HET: MSE; 2.0A {Bordetella pertussis}", "query_length": 84, "query_eno": 7.0, "target_length": 98, "target_eno": 12.0, "alignment": { "score": 37.14, "bit_score": 43.2, "evalue": 0.0012, "pvalue": 0.0012, "n_identities": 13, "n_positives": 56, "n_gaps": 14, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 94, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeee ee eee eeeeeee hhh eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNGRWFNSIRAWRIE", "target_aln": "ELSARVLECGAMRHTP--AGL-PALELLLVHESEVVEAGHPRRVELTISAVALGDLALLLADTPLGTEMQVQGFLAPARK-DSVKVKLHLQQAR", "middle": "E+++++++ ++++ + +G+ ++ E++L++E+ + + +I+++++GD+ +LL +++G+E++V+++++ +++ +++ +++++ +++", "computed_K_ungapped": "0.1249", "computed_lambda_ungapped": "0.9542", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4797", "entropy": 0.1963, "expected_score": -0.2070, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q928X8|SSB3_LISIN Single-stranded DNA-binding protein 3 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 \/ CLIP 11262) OX=272626 GN=ssb3 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 160, "target_eno": 11.0, "alignment": { "score": 39.61, "bit_score": 43.2, "evalue": 0.0012, "pvalue": 0.0012, "n_identities": 12, "n_positives": 53, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeeee eeeeeee hh eeeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPELRYTP--AG-VAVATFTLAVNRPFKNGQGEQEADFIQCVVWRKPAENVANFLKKGSLAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQ", "middle": " ++G++ + ++++ + +G + +F+L +++ Q +++I +++++++++++ +++G++++V+ +++ R+++G ++ ++I+A +++", "computed_K_ungapped": "0.1332", "computed_lambda_ungapped": "1.0744", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5401", "entropy": 0.2306, "expected_score": -0.2142, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "1QVC_C SINGLE STRANDED DNA BINDING PROTEIN MONOMER; BETA-BARREL, SINGLE STRANDED DNA BINDING PROTEIN, DNA BINDING PROTEIN; 2.2A {Escherichia coli} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 145, "target_eno": 12.0, "alignment": { "score": 39.09, "bit_score": 43.1, "evalue": 0.0013, "pvalue": 0.0013, "n_identities": 13, "n_positives": 60, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 110, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeee eeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILVGNLGQDP--EVRYMPNGG-AVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQ", "middle": "+++G++++ ++ +++NG+ ++ +++L+T+E ++++++++++FG+ ++++ +++G++V+++++++ R+W++ R+ ++++++ +++", "computed_K_ungapped": "0.1376", "computed_lambda_ungapped": "1.1428", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5745", "entropy": 0.2477, "expected_score": -0.2175, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q82CI4|SSB2_STRAW Single-stranded DNA-binding protein 2 OS=Streptomyces avermitilis (strain ATCC 31267 \/ DSM 46492 \/ JCM 5070 \/ NBRC 14893 \/ NCIMB 12804 \/ NRRL 8165 \/ MA-4680) OX=227882 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 158, "target_eno": 11.0, "alignment": { "score": 39.23, "bit_score": 43.1, "evalue": 0.0013, "pvalue": 0.0013, "n_identities": 13, "n_positives": 57, "n_gaps": 22, "aln_length": 101, "query_from": 1, "query_to": 83, "target_from": 7, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeeee ee eeeeeeeee eeeeeee eeeeeeeeeeee eeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWRI", "target_aln": "CVVGNVATRPVYRELAS--G--ASARFRLAVTSRYWDREKSEWKDGHTNFFTVWANRALATNVGASLSVGDPVVVQGRLKVRTEAREGQNWTSADIDALAV", "middle": " ++G+++++ ++++++S G ++++F L +++ + ++++++++++++++++ ++VGD+V+V+++++ R++++ ++ ++I+A ++", "computed_K_ungapped": "0.1447", "computed_lambda_ungapped": "1.1305", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5683", "entropy": 0.2717, "expected_score": -0.2250, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q98PV9|SSB_MYCPU Single-stranded DNA-binding protein OS=Mycoplasma pulmonis (strain UAB CTIP) OX=272635 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 181, "target_eno": 9.0, "alignment": { "score": 39.60, "bit_score": 43.1, "evalue": 0.0013, "pvalue": 0.0013, "n_identities": 10, "n_positives": 59, "n_gaps": 16, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeeeee eeeeeeee hh eeeeeeeeeeeee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG--RWFNSIRAWRIE", "target_aln": "CIVGRITRDPYN--NITNSG-ISYSRFTIAVDRRNFSSQRSENITDYIPVVAWRGLSEFIKKNVFKGTLVSVEGSLQSYIRSEDKNTSYEVNIENFS", "middle": " I+G+I++ ++ ++++G ++++F++ ++++ +++I+++++++ ++++ N++ G++V+V+++++ +++++ ++ +++++ +++", "computed_K_ungapped": "0.1318", "computed_lambda_ungapped": "1.1064", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5562", "entropy": 0.2472, "expected_score": -0.2213, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|B8A5I7|SSBP_DANRE Single-stranded DNA-binding protein, mitochondrial OS=Danio rerio OX=7955 GN=ssbp1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 146, "target_eno": 11.0, "alignment": { "score": 37.34, "bit_score": 43.0, "evalue": 0.0013, "pvalue": 0.0013, "n_identities": 15, "n_positives": 55, "n_gaps": 27, "aln_length": 108, "query_from": 1, "query_to": 84, "target_from": 33, "target_to": 137, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeee eeeeeeeee ee eeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "QILGRVGQDPVMRQV--EGR-NPVTIFSMATNEMWRSGEGEPVGAGDVTQKTTWHRISVFKPGLRDVAYQYVKKGSRIFVEGKLDYGEYVDKNNVRRQATTIIADNIV", "middle": "+I+G+++ ++++ +++ ++ +F+++T+E Q ++++++++F++ +D++ +++G++++V+ +++ +E+++ R++++I+A++I+", "computed_K_ungapped": "0.1453", "computed_lambda_ungapped": "1.2621", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6344", "entropy": 0.2898, "expected_score": -0.2199, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q88QK5|SSB_PSEPK Single-stranded DNA-binding protein OS=Pseudomonas putida (strain ATCC 47054 \/ DSM 6125 \/ NCIMB 11950 \/ KT2440) OX=160488 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 181, "target_eno": 9.0, "alignment": { "score": 38.82, "bit_score": 43.0, "evalue": 0.0014, "pvalue": 0.0014, "n_identities": 15, "n_positives": 47, "n_gaps": 20, "aln_length": 98, "query_from": 1, "query_to": 81, "target_from": 9, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eee eeeeeeee eeeeeee hhhhhhh eeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAW", "target_aln": "ILVGTCGQDPEVRYLP--NG-NAVTNLSLATSEQWTDKQSGQKVERTEWHRVSLFGKVAEIAGEYLRKGSQCYIEGKLQTREWEKDGIKRYTTEIIVD", "middle": " ++G++ + ++++ + NG ++ +++L T+EQ + ++ +++FG++++ + +++G++++++++++ REW++ R+ ++I++ ", "computed_K_ungapped": "0.1581", "computed_lambda_ungapped": "1.2062", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6063", "entropy": 0.3228, "expected_score": -0.2590, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A5U9U9|PRIB_HAEIE Primosomal replication protein N OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 108, "target_eno": 12.0, "alignment": { "score": 37.60, "bit_score": 42.9, "evalue": 0.0014, "pvalue": 0.0014, "n_identities": 18, "n_positives": 54, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 13, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeeeeeeee eeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYP---------KKICFEFFGDK-IDLL-NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "SVMGVVSQLPKRL--KSPSG-IEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIE", "middle": " ++G++++ +++ +S++G + +F+LE++++++ +K++++++G++ I+++ +I+VG++++V+++I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1250", "computed_lambda_ungapped": "1.0138", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5096", "entropy": 0.2095, "expected_score": -0.2061, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q55499|SSB1_SYNY3 Single-stranded DNA-binding protein 1 OS=Synechocystis sp. (strain PCC 6803 \/ Kazusa) OX=1111708 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 121, "target_eno": 12.0, "alignment": { "score": 37.45, "bit_score": 42.9, "evalue": 0.0015, "pvalue": 0.0015, "n_identities": 12, "n_positives": 59, "n_gaps": 17, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeeeee eeeeee eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "HLVGRAGRDPEVKYFE--SG-NVVCNFTLAVNRRTSKKDEPPDWFDLEIWGKTAEIAGNYVKKGSLIGIQGSLKFDHWEDRNSGTPRSKPVIRVNNLD", "middle": " ++G++ ++ ++++ + +G ++ +F+L +++ + P+++++E++G++++++ ++++G++++++++++ ++W++ R+ ++IR+++++", "computed_K_ungapped": "0.1363", "computed_lambda_ungapped": "1.0877", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5468", "entropy": 0.2338, "expected_score": -0.2086, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9CDM9|SSB2_LACLA Single-stranded DNA-binding protein 2 OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 10.0, "alignment": { "score": 39.40, "bit_score": 42.9, "evalue": 0.0015, "pvalue": 0.0015, "n_identities": 12, "n_positives": 57, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeee hheeeeehhhhhhhhhhh eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY--------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRITRDPELRYTP--QN-QAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADSFQ", "middle": " ++G+I++ ++++ + ++ + +F+L +++Q+ +++I ++++++++++L +++G++++V+++I+ R++++ +++++++A +++", "computed_K_ungapped": "0.1478", "computed_lambda_ungapped": "1.1494", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5778", "entropy": 0.2754, "expected_score": -0.2394, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P59931|SSB_HELHP Single-stranded DNA-binding protein OS=Helicobacter hepaticus (strain ATCC 51449 \/ 3B1) OX=235279 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 170, "target_eno": 10.0, "alignment": { "score": 39.43, "bit_score": 42.9, "evalue": 0.0015, "pvalue": 0.0015, "n_identities": 13, "n_positives": 53, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeeeee hhhhhh eeeeeeeee ee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IIIGNLTRDVELRYL--PSG-SALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSAEVANQYLRKGSKILIEGRLSLESWNDQSGAKRSRHTITAESMQ", "middle": " I+G++++ ++++ ++G ++ +++L ++++ +I++++FG++++++ ++ G++++++++++ ++WN+ R+ ++I+A +++", "computed_K_ungapped": "0.1404", "computed_lambda_ungapped": "1.0991", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5525", "entropy": 0.2521, "expected_score": -0.2253, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P0A4K0|SSB1_NOSS1 Single-stranded DNA-binding protein 1 OS=Nostoc sp. (strain PCC 7120 \/ SAG 25.82 \/ UTEX 2576) OX=103690 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 119, "target_eno": 12.0, "alignment": { "score": 38.13, "bit_score": 42.7, "evalue": 0.0016, "pvalue": 0.0016, "n_identities": 13, "n_positives": 56, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeeee eeeeeee eee eeeeeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE----EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAWRIE", "target_aln": "TLVGRVGTD--PDIKYFESG-SVKCRLTLAVNRRSKNDKPDWFTLELWDKTAEVAGNYVRKGSLIGVKGSLKFDSWSDRQTGVNRSTPVIRVDQLE", "middle": " ++G++ + ++ ++++G +K++++L ++ ++ P+++++E+++++++++ +++G++++V+++++++ W++ R+ ++IR+ ++E", "computed_K_ungapped": "0.1244", "computed_lambda_ungapped": "1.0120", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5087", "entropy": 0.2082, "expected_score": -0.2051, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q92FR5|SSB1_LISIN Single-stranded DNA-binding protein 1 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 \/ CLIP 11262) OX=272626 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 179, "target_eno": 10.0, "alignment": { "score": 39.52, "bit_score": 42.7, "evalue": 0.0017, "pvalue": 0.0017, "n_identities": 12, "n_positives": 57, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPELRYT--PAG-VAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQ", "middle": " ++G++ + ++++ ++G ++ +F+L +++ + +++I++++++++++++ N +++G++++V+++++ R+++G ++ ++I+A +++", "computed_K_ungapped": "0.1445", "computed_lambda_ungapped": "1.0829", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5443", "entropy": 0.2526, "expected_score": -0.2328, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q6LM42|PRIB_PHOPR Primosomal replication protein N OS=Photobacterium profundum (strain SS9) OX=298386 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 104, "target_eno": 12.0, "alignment": { "score": 38.47, "bit_score": 42.7, "evalue": 0.0017, "pvalue": 0.0017, "n_identities": 20, "n_positives": 48, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeee eeeeeeeee eeeee eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "ELSGVIAKDPKRSQS--PAG-VPHCHFVLEHRSYQREADLPRQVYCYINVVSSGKGLQVLTQDLAVGVHTKVAGFISYQTGRNGIGKLVLHADHIE", "middle": "E++G+I++ ++++ ++G ++ +FVLE++++ + +I+++++G+++++L ++VG+++KV+ I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1258", "computed_lambda_ungapped": "0.9244", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4647", "entropy": 0.1801, "expected_score": -0.1970, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9A894|SSB_CAUVC Single-stranded DNA-binding protein OS=Caulobacter vibrioides (strain ATCC 19089 \/ CB15) OX=190650 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 167, "target_eno": 10.0, "alignment": { "score": 39.21, "bit_score": 42.7, "evalue": 0.0017, "pvalue": 0.0017, "n_identities": 14, "n_positives": 60, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee ee eeeeeeee eeeeeee hhhhhhh eeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKID-LL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGADPEIRSLGS--G-DRVANLRIATSETWRDRSSGERKEKTEWHRVVIFNDNLVKVAEQYLRKGSTVYIEGALQTRKWTDNTGQEKYSTEIVLQKF", "middle": "+++G+++A +++S++S G ++++++++T+E ++++++++++F+D+ + ++ +++G++V+++++++ R+W++ +++++I+++++", "computed_K_ungapped": "0.1477", "computed_lambda_ungapped": "1.1416", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5738", "entropy": 0.2709, "expected_score": -0.2357, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q5HIS8|SSB1_STAAC Single-stranded DNA-binding protein 1 OS=Staphylococcus aureus (strain COL) OX=93062 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 167, "target_eno": 10.0, "alignment": { "score": 39.18, "bit_score": 42.7, "evalue": 0.0017, "pvalue": 0.0017, "n_identities": 11, "n_positives": 59, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeee eeeeee eeeeeeeeee eeeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPEYRTTP--SG-VSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQ", "middle": " ++G++++ ++++ + +G ++++F L +++ + + +I++++F++++D++ N +++G++++V+++++ R++++ ++++++++ +++", "computed_K_ungapped": "0.1459", "computed_lambda_ungapped": "1.0976", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5517", "entropy": 0.2557, "expected_score": -0.2296, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8L2A6|SSB_PROVU Single-stranded DNA-binding protein OS=Proteus vulgaris OX=585 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 195, "target_eno": 10.0, "alignment": { "score": 39.30, "bit_score": 42.6, "evalue": 0.0018, "pvalue": 0.0018, "n_identities": 11, "n_positives": 59, "n_gaps": 24, "aln_length": 105, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 111, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee ee ", "target_secstr": "eeeeee eeeeeeeee eeeeeeeee eeeeeeeeee eeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW---RIE", "target_aln": "ILVGNVGQDPEVRYM--PNG-GAVANLTLATSETWRDKQTGESKEKTEWHRVVLFGKLAEITGEFVKKGSQIYIEGALQTRKWTDQAGVEKYTTEVVVNVGGTMQ", "middle": " ++G++ + +++++ +NG ++ +++L+T+E +++ ++++++FG++++++ +++G++++++++++ R+W++ ++ +++++ +++", "computed_K_ungapped": "0.1440", "computed_lambda_ungapped": "1.1511", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5786", "entropy": 0.2750, "expected_score": -0.2330, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P66850|SSB1_STRA3 Single-stranded DNA-binding protein 1 OS=Streptococcus agalactiae serotype III (strain NEM316) OX=211110 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 163, "target_eno": 10.0, "alignment": { "score": 38.96, "bit_score": 42.6, "evalue": 0.0019, "pvalue": 0.0019, "n_identities": 11, "n_positives": 58, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeee eeeeeee hhhh eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRMTRDAELRYTP--SN-QAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQ", "middle": " ++G++++ ++++ + ++ ++ +F+L +++ + +++I ++++++++++L N +++G++V++++ I+ R++++ +++++++A +++", "computed_K_ungapped": "0.1419", "computed_lambda_ungapped": "1.1234", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5647", "entropy": 0.2564, "expected_score": -0.2271, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3VDY_A Single-stranded DNA-binding protein ssbB; OB fold, single-strand DNA binding, ssDNA, DNA BINDING PROTEIN-DNA complex; 2.8A {Bacillus subtilis}", "query_length": 84, "query_eno": 7.0, "target_length": 116, "target_eno": 12.0, "alignment": { "score": 37.79, "bit_score": 42.5, "evalue": 0.0019, "pvalue": 0.0019, "n_identities": 11, "n_positives": 60, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeee eeeeeeeeeee eeeeeeeeeee eee eeeeeeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "MLVGRLTKDPDLRYTS--AG-AAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTVR", "middle": " ++G++ + ++++ + +G ++++++L +++ + ++++++++++++++++ + +Q+G++V+VS++I++R++++ ++ ++++A +++", "computed_K_ungapped": "0.1199", "computed_lambda_ungapped": "1.0364", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5210", "entropy": 0.1908, "expected_score": -0.1839, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9AFI5|SSB_MYCS2 Single-stranded DNA-binding protein OS=Mycolicibacterium smegmatis (strain ATCC 700084 \/ mc(2)155) OX=246196 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 165, "target_eno": 11.0, "alignment": { "score": 38.34, "bit_score": 42.5, "evalue": 0.002, "pvalue": 0.002, "n_identities": 10, "n_positives": 59, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee ee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE--------EQ----YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVVGNLTADPELRFT--PSG-AAVANFTVASTPRMFDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEIG", "middle": "+++G+++A ++++ ++G ++ +F + ++ ++ ++++++++++++++++ +++G++V+V+++++ R++++ R+ +++++ +I+", "computed_K_ungapped": "0.1443", "computed_lambda_ungapped": "1.1838", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5951", "entropy": 0.2984, "expected_score": -0.2420, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q87LA3|SSB_VIBPA Single-stranded DNA-binding protein OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 176, "target_eno": 10.5, "alignment": { "score": 38.52, "bit_score": 42.4, "evalue": 0.0021, "pvalue": 0.0021, "n_identities": 10, "n_positives": 62, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 83, "target_from": 10, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET---E---E---QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGNDPEIRYMPN--GGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRYSTEVVVQGF", "middle": "+++G++++ +++++++ G ++ + +++++ + + ++++++++++FG++++++ +++G++V+V+++++ R+W++ R+ +++++ ++", "computed_K_ungapped": "0.1530", "computed_lambda_ungapped": "1.2273", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6169", "entropy": 0.3166, "expected_score": -0.2509, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P37455|SSBA_BACSU Single-stranded DNA-binding protein A OS=Bacillus subtilis (strain 168) OX=224308 GN=ssbA PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 172, "target_eno": 10.0, "alignment": { "score": 39.01, "bit_score": 42.4, "evalue": 0.0021, "pvalue": 0.0021, "n_identities": 10, "n_positives": 55, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeee eeeeeeeee hhhhhhh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ--------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPELRYT--PNG-AAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQ", "middle": " ++G++ + ++++ +NG ++ +F+L ++++ + +I +++++++ +++ +++G++++V+++++ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1425", "computed_lambda_ungapped": "1.0922", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5490", "entropy": 0.2576, "expected_score": -0.2348, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8Y2B4|SSB_RALSO Single-stranded DNA-binding protein OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 178, "target_eno": 9.0, "alignment": { "score": 38.99, "bit_score": 42.4, "evalue": 0.0021, "pvalue": 0.0021, "n_identities": 15, "n_positives": 56, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhh eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWRIE", "target_aln": "IIVGNLGADPETR--YMPSG-DAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAEIAGEYLKKGSQVYVEGRLKTRQWEKDGQKQYSTEIVAEQMQ", "middle": " I+G++ A +++ ++++G +++++++ T++ +++++++++FFG++++ + +++G++V+V+++++ R+W++ +++++I+A +++", "computed_K_ungapped": "0.1525", "computed_lambda_ungapped": "1.1302", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5681", "entropy": 0.2902, "expected_score": -0.2546, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9P7N0|MUG11_SCHPO Meiotically up-regulated gene 11 protein OS=Schizosaccharomyces pombe (strain 972 \/ ATCC 24843) OX=284812 GN=mug11 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 392, "target_eno": 9.0, "alignment": { "score": 43.66, "bit_score": 42.2, "evalue": 0.0024, "pvalue": 0.0024, "n_identities": 7, "n_positives": 54, "n_gaps": 6, "aln_length": 76, "query_from": 1, "query_to": 73, "target_from": 151, "target_to": 223, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeeee eeee eeeeeeee eeeeeee hhhhhhh eeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDK-IDLL-NIQVGDEVKVSFDIEGREWNGR", "target_aln": "NVLVAIQWKEEFEIFNNETKKSLPKQTIHVHDISG---SAMIVLIGESQVKSALSWNNETILLIHNAIAYRTNTGM", "middle": " + ++I++++++++++++++ + +KQ++++ ++ +++++++G++ ++++ +++++++++++ I +R+++G+", "computed_K_ungapped": "0.1532", "computed_lambda_ungapped": "1.1357", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5709", "entropy": 0.3087, "expected_score": -0.2658, "min_score": -3, "max_score": 4 } }}, {"hit_record": { "target_description": "sp|P0C118|SSB_BRUAB Single-stranded DNA-binding protein OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 168, "target_eno": 11.0, "alignment": { "score": 38.93, "bit_score": 42.2, "evalue": 0.0024, "pvalue": 0.0024, "n_identities": 12, "n_positives": 58, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eee eeeeeeeee eeeeeee hhhhhh eeeeeeeee eeeeeeee e", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGADPEIRRL--NSG-DMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSKEIVLQKF", "middle": "+++G+++A ++++ ++G +++++++T+E + ++++++++F++ ++ + +++G++V++++++++R+W++ R++++I++ ++", "computed_K_ungapped": "0.1412", "computed_lambda_ungapped": "1.1178", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5619", "entropy": 0.2622, "expected_score": -0.2325, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9ZJY2|SSB_HELPJ Single-stranded DNA-binding protein OS=Helicobacter pylori (strain J99 \/ ATCC 700824) OX=85963 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 181, "target_eno": 9.0, "alignment": { "score": 38.74, "bit_score": 42.1, "evalue": 0.0026, "pvalue": 0.0026, "n_identities": 12, "n_positives": 56, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee e e eeeeeeee eeeeeeeee hhhhhhhh eeeeeeeee eeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY----------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "IMVGRLTRNVELK--YLPSG-SAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQ", "middle": " ++G++ + +++ +++G ++ +++L+T++++ + +I++++FG++++ + +++G++V+++++++ ++W++ ++ ++I+A +++", "computed_K_ungapped": "0.1464", "computed_lambda_ungapped": "1.1225", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5643", "entropy": 0.2729, "expected_score": -0.2403, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9KUW2|SSB_VIBCH Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 \/ El Tor Inaba N16961) OX=243277 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 177, "target_eno": 11.0, "alignment": { "score": 38.28, "bit_score": 42.1, "evalue": 0.0026, "pvalue": 0.0026, "n_identities": 10, "n_positives": 60, "n_gaps": 21, "aln_length": 101, "query_from": 1, "query_to": 83, "target_from": 10, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee eeeeeeee eeeeeeee hh eeeeeeeeeeee eeeeeeee e", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILIGNLG--QDPEVRYMPSGG-AVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVVVQGY", "middle": " ++G++ ++++ ++++G+ + +++++T+E ++++++ ++++G++++ + +++G++V+++++++ R+W++ R++++++++++", "computed_K_ungapped": "0.1445", "computed_lambda_ungapped": "1.1727", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5895", "entropy": 0.2926, "expected_score": -0.2413, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P0A611|SSB_MYCBO Single-stranded DNA-binding protein OS=Mycobacterium bovis (strain ATCC BAA-935 \/ AF2122\/97) OX=233413 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 164, "target_eno": 10.0, "alignment": { "score": 37.67, "bit_score": 42.0, "evalue": 0.0028, "pvalue": 0.0028, "n_identities": 12, "n_positives": 54, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeee eeeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TIVGNLTAD--PELRFTPSG-AAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIG", "middle": " I+G++ A +++ ++++G ++ +F + +++ ++++ +++++++++++ +++G++V+VS++++ R++++ R+ +++++ +I+", "computed_K_ungapped": "0.1527", "computed_lambda_ungapped": "1.1740", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5902", "entropy": 0.3028, "expected_score": -0.2486, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q57YG2|TB927_TRYB2 Uncharacterized protein Tb927.8.680, mitochondrial OS=Trypanosoma brucei brucei (strain 927\/4 GUTat10.1) OX=185431 GN=Tb927.8.680 PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 169, "target_eno": 10.0, "alignment": { "score": 37.72, "bit_score": 41.8, "evalue": 0.0031, "pvalue": 0.0031, "n_identities": 13, "n_positives": 51, "n_gaps": 48, "aln_length": 124, "query_from": 1, "query_to": 81, "target_from": 18, "target_to": 136, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeeee eee eeeeeeeeeee eeeee eeeeeee hhhhhhhhhh eeeeeeeeee ee eeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY-----------------------------------PKKICFEFFGD--KIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAW", "target_aln": "TMVGAMH---DIQVGFLDRC--SVFQFTLTCTVLDFQKVAEPQPKSPGSLPSSTRTAPNPNGEEVEKHINKEQYTVRCLGSEAYTEALKNYLDDGCIVRVIGRLKTTEVVDAGKKQPFPCIIVE", "middle": " ++G++ ++Q+G+ +++ ++ +F+L++++ + ++++ ++++G+ ++ L +++G++V+V+ +++ +E+++ ++F++I++ ", "computed_K_ungapped": "0.1585", "computed_lambda_ungapped": "1.1751", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5907", "entropy": 0.3378, "expected_score": -0.2770, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8DCJ0|SSB_VIBVU Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 179, "target_eno": 10.0, "alignment": { "score": 37.84, "bit_score": 41.8, "evalue": 0.0031, "pvalue": 0.0031, "n_identities": 10, "n_positives": 59, "n_gaps": 21, "aln_length": 100, "query_from": 1, "query_to": 82, "target_from": 10, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee eeeeeeeee eeeeeeee hhhhhhhh eeeeeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE--------E---QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAWR", "target_aln": "ILVGNLGNDPEIRYMP--SG-GAVANITVATSETWRDKATGEPREKTEWHRVTLYGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQNGQDRYSTEVVVQG", "middle": "+++G++ + ++++ + +G ++ +++++T+ + +++++++++++G++++++ +++G++V++++ ++ R+W+ G R+ +++++++", "computed_K_ungapped": "0.1430", "computed_lambda_ungapped": "1.2046", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6055", "entropy": 0.3057, "expected_score": -0.2469, "min_score": -2, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q58559|RPA_METJA Replication factor A OS=Methanocaldococcus jannaschii (strain ATCC 43067 \/ DSM 2661 \/ JAL-1 \/ JCM 10045 \/ NBRC 100440) OX=243232 GN=rpa PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 645, "target_eno": 9.0, "alignment": { "score": 44.02, "bit_score": 41.7, "evalue": 0.0034, "pvalue": 0.0034, "n_identities": 17, "n_positives": 46, "n_gaps": 6, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 79, "target_to": 147, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeeeee eeeeeee eeeeee eeeee eeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGR", "target_aln": "EITGVITDISEIKTFKRRDGSLGKYKRITIADKSG---TIRMTLWDDLAEL-DVKVGDVIKIE-RARARKWRNN", "middle": "EITG+I++I++++++++++G + K++++++ ++ +I++++++D+++L +++VGD++K++ +++ R+W+++", "computed_K_ungapped": "0.1399", "computed_lambda_ungapped": "1.1581", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5821", "entropy": 0.2486, "expected_score": -0.2116, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "6RUP_A Single-stranded DNA-binding protein, mitochondrial; Single-stranded DNA binding protein, mitochondria, mtDNA, mtDNA replication, mitochondrial RNA granules, DNA BINDING PROTEIN; 2.1A {Homo sapiens} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 142, "target_eno": 12.0, "alignment": { "score": 37.47, "bit_score": 41.6, "evalue": 0.0036, "pvalue": 0.0036, "n_identities": 15, "n_positives": 56, "n_gaps": 27, "aln_length": 108, "query_from": 1, "query_to": 84, "target_from": 26, "target_to": 130, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeeeee ee eeeeeeee eeeeeeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "HLLGRVGQDPVLRQ--VEGK-NPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNNVRRQATTIIADNII", "middle": " ++G++ + ++++ ++++ ++++F+L T+E Q ++++++++F++ +D++ +++G++++++++I+ +E+++ R++++I+A++I+", "computed_K_ungapped": "0.1205", "computed_lambda_ungapped": "1.1181", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5620", "entropy": 0.2114, "expected_score": -0.1857, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|O83101|SSB_TREPA Single-stranded DNA-binding protein OS=Treponema pallidum (strain Nichols) OX=243276 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 176, "target_eno": 10.0, "alignment": { "score": 37.59, "bit_score": 41.6, "evalue": 0.0037, "pvalue": 0.0037, "n_identities": 12, "n_positives": 56, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeeeee eeeeeeee hhhhhhh eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "VLVGRLTRDAELKYTSA--GG-ALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQGEVISQYLIKGKQVAVEGELRQSRWEQEGQSRSKVEISATNVQ", "middle": " ++G++++ ++++ ++ G+ + +F++ +++ + +++++++++G++++ + +++G++V+V+++++ ++W+ G R+ ++I+A +++", "computed_K_ungapped": "0.1512", "computed_lambda_ungapped": "1.1554", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5808", "entropy": 0.2865, "expected_score": -0.2389, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3LGJ_B Single-stranded DNA-binding protein; NIAID, Cat Scratch Fever, Rochalimaea, lyme disease, ALS Collaborative Crystallography, DNA replication, DNA-binding, Structural Genomics, Seattle; 2.5A {Bartonella henselae} SCOP: b.40.4.0, l.1.1.1", "query_length": 84, "query_eno": 7.0, "target_length": 169, "target_eno": 12.0, "alignment": { "score": 37.14, "bit_score": 41.5, "evalue": 0.0038, "pvalue": 0.0038, "n_identities": 13, "n_positives": 54, "n_gaps": 22, "aln_length": 100, "query_from": 1, "query_to": 81, "target_from": 27, "target_to": 123, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeeee ee eeeeeeeee hhhhhhh eeeeeeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFG-DKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAW", "target_aln": "MLIGYLGDDPESKTMT--SG-AEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIVLP", "middle": "+++G++ ++ ++++ T +G ++ +F++ T+E + ++++++++F+ + ++++ +++G++V+++++++ R+W++ R++++I++ ", "computed_K_ungapped": "0.1384", "computed_lambda_ungapped": "1.2803", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6436", "entropy": 0.2885, "expected_score": -0.2176, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q89L50|SSB_BRADU Single-stranded DNA-binding protein OS=Bradyrhizobium diazoefficiens (strain JCM 10833 \/ BCRC 13528 \/ IAM 13628 \/ NBRC 14792 \/ USDA 110) OX=224911 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 164, "target_eno": 11.0, "alignment": { "score": 38.20, "bit_score": 41.5, "evalue": 0.0039, "pvalue": 0.0039, "n_identities": 9, "n_positives": 62, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eeeeeeeee eeeeeee eehhhhh eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGKDPEIR--RTQDG-RPIANLSIATSETWRDKNSGERKEKTEWHRVVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQSGVEKYSTEVVLQGF", "middle": " ++G++++ +++ ++++G +++++++ T+E + ++++++++F++ +++++ +++G++V+++++++ R+W++ ++ ++++++++", "computed_K_ungapped": "0.1416", "computed_lambda_ungapped": "1.1164", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5612", "entropy": 0.2676, "expected_score": -0.2388, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q1RK72|SSB_RICBR Single-stranded DNA-binding protein OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 150, "target_eno": 11.0, "alignment": { "score": 36.65, "bit_score": 41.5, "evalue": 0.0039, "pvalue": 0.0039, "n_identities": 10, "n_positives": 59, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee eeeeeeee eeeeee eee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "TLIGNLGRDPEIRT--TGEG-KEIANLSLATTDIWKDRVTGEKKEKTEWHRVVIFNEGLVSVVKNYVKKGSKLYIEGSLQTRKWNDSSGVEKYTTEIVLQNF", "middle": "+++G++++ ++++ +++G +++++L T+++ ++++ +++F++ +++ + +++G+++++++++++R+WN+ ++ ++I++ ++", "computed_K_ungapped": "0.1364", "computed_lambda_ungapped": "1.1531", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5796", "entropy": 0.2539, "expected_score": -0.2128, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9CLN9|PRIB_PASMU Primosomal replication protein N OS=Pasteurella multocida (strain Pm70) OX=272843 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 108, "target_eno": 12.0, "alignment": { "score": 36.22, "bit_score": 41.5, "evalue": 0.004, "pvalue": 0.004, "n_identities": 19, "n_positives": 50, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 13, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeeee eeeeeeeee ee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "SLIGIVASQPKRHQ--SPNG-IYHCQFVLEHRSIQEEAGLSRQAWCKMPVQMSGNQFREKTQSITVGSQLLVVGFISSHKTANGLSQLVLHAEQIE", "middle": " ++G++++ ++++ S+NG ++++FVLE+++ + ++K++++++G+ ++ + I+VG++++V+ +I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1243", "computed_lambda_ungapped": "1.0190", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5122", "entropy": 0.2059, "expected_score": -0.2017, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|O69302|SSB_CAMJE Single-stranded DNA-binding protein OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 \/ NCTC 11168) OX=192222 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 183, "target_eno": 9.0, "alignment": { "score": 38.09, "bit_score": 41.4, "evalue": 0.004, "pvalue": 0.004, "n_identities": 12, "n_positives": 55, "n_gaps": 19, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 102, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeeee hh eeeeeeeeee eeeeeeeee hhh eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGNLTRDIEMRYA--QSG-SAIGASAIAVTRRFTANGEKREETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME", "middle": " ++G++++ ++++ ++G ++ ++++ ++++ + +I+++F+G++++ + +++G++V+++++++ ++W++ R+ +SI++ ++E", "computed_K_ungapped": "0.1371", "computed_lambda_ungapped": "1.0682", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5370", "entropy": 0.2373, "expected_score": -0.2200, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A3N1H2|PRIB_ACTP2 Primosomal replication protein N OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 124, "target_eno": 12.0, "alignment": { "score": 36.45, "bit_score": 41.4, "evalue": 0.0043, "pvalue": 0.0043, "n_identities": 19, "n_positives": 51, "n_gaps": 17, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 17, "target_to": 109, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eee ee eeeeeeeee ee eeeeeeeee eee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "ILSGSVAS--TVKQSQNPLGVPNY--RFWLEHRSIQTEVNLERQAWCKIQVILNGNQFSLITQQIKLGDKIRVYGFIHTHKDYNGLSQLVVHAEHIE", "middle": " ++G++++ ++++ ++++G ++ +F LE+++ Q ++KI+++++G+ ++L+ I++GD+++V+++I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1345", "computed_lambda_ungapped": "1.0814", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5436", "entropy": 0.2258, "expected_score": -0.2046, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8G757|SSB_BIFLO Single-stranded DNA-binding protein OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 218, "target_eno": 5.5, "alignment": { "score": 35.80, "bit_score": 41.3, "evalue": 0.0045, "pvalue": 0.0045, "n_identities": 14, "n_positives": 52, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee eeeeeeeeee eee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAWRIE", "target_aln": "TIVGNLTAD--PELRTIGSG-VTVASFTIASTPRTWNRQTNQFEDGQALFMRCSAWRDLADHCAQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEIG", "middle": " I+G++ A ++ T+++G ++++F++ ++++ ++++ +++++D++D++ +++G++V ++ +++ R+++ G R+ +++++ +I+", "computed_K_ungapped": "0.1628", "computed_lambda_ungapped": "1.2558", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6313", "entropy": 0.3536, "expected_score": -0.2650, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9RHF4|SSB2_SALTI Single-stranded DNA-binding protein 2 OS=Salmonella typhi OX=90370 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 178, "target_eno": 10.0, "alignment": { "score": 38.03, "bit_score": 41.2, "evalue": 0.0048, "pvalue": 0.0048, "n_identities": 10, "n_positives": 62, "n_gaps": 21, "aln_length": 100, "query_from": 1, "query_to": 82, "target_from": 10, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee eee eeeeeeee eeeeeee ee eee eeeeeeeeee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWR", "target_aln": "ILVGNLGQ--DPEVRYMPNGG-AVVNLSLATSDTWTDKQTGDKKERTEWHRVVLYGKLAEIASEYLRKGSQVYIEGALRTRKWTDQSGVEKYTTEVVVSQ", "middle": " ++G++ + ++++ +++NG+ +++++L+T++ +++++++++++G++++++ + +++G++V+++++++ R+W++ ++ +++++ +", "computed_K_ungapped": "0.1446", "computed_lambda_ungapped": "1.1383", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5722", "entropy": 0.2618, "expected_score": -0.2240, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A6VMD5|PRIB_ACTSZ Primosomal replication protein N OS=Actinobacillus succinogenes (strain ATCC 55618 \/ DSM 22257 \/ 130Z) OX=339671 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 107, "target_eno": 12.0, "alignment": { "score": 35.97, "bit_score": 41.2, "evalue": 0.0049, "pvalue": 0.0049, "n_identities": 17, "n_positives": 50, "n_gaps": 16, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 13, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeee eee eeeeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "SLIGVT---ESVKRSKSPNG-IEHCRIWLEHRSEQQEAGLIRQARCKMPIQISGHQLIHKTQGITVGSKILVVGFITSHKQTNGLNQLVLHAEHIE", "middle": " ++G++ ++++++S+NG ++ +++LE+++ ++K++++++G+ ++++ I+VG+++ V+ +I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1338", "computed_lambda_ungapped": "1.0138", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5096", "entropy": 0.2130, "expected_score": -0.2101, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8GAN5|SSB_PAENI Single-stranded DNA-binding protein OS=Paenarthrobacter nicotinovorans OX=29320 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 170, "target_eno": 10.0, "alignment": { "score": 37.77, "bit_score": 41.1, "evalue": 0.0051, "pvalue": 0.0051, "n_identities": 9, "n_positives": 56, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeee eeeeeeeee ee eeeeeeeeeeeee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVIGNLTN--DPELRFTPSG-SAVANFTIASTPRTFDRQASEWKDGETLFLRASVWREMAENVAGSLTKGTRVIASGRLKSRSYETKEGDNRTVVELEVDEIG", "middle": " ++G++ + +++ ++++G + +F + ++++ ++++ +++++++++++ +++G++V++S +++ R++++ R+ +++++ +I+", "computed_K_ungapped": "0.1444", "computed_lambda_ungapped": "1.1476", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5769", "entropy": 0.3036, "expected_score": -0.2547, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q87L73|PRIB_VIBPA Primosomal replication protein N OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 100, "target_eno": 12.0, "alignment": { "score": 36.35, "bit_score": 41.1, "evalue": 0.0052, "pvalue": 0.0052, "n_identities": 15, "n_positives": 56, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeeee eeeeee eeeeee eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------Q---YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-RWFNSIRAWRIE", "target_aln": "ELSGTIAKPPIRSKSP--GG-IEHCRFWLEHRSTVIEADLPRQVYCRMPVVVSGLRSQAITQNLVQGSNIKVSGFVAYQTGRNGVGKLVLHADNIT", "middle": "E++G+I++ ++++ + +G ++ +F+LE+++ + +++++++++G++ +++ N+++G+++KVS +++++++++ ++ ++++A +I+", "computed_K_ungapped": "0.1233", "computed_lambda_ungapped": "0.9376", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4713", "entropy": 0.1881, "expected_score": -0.2004, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O27438|RPA_METTH Replication factor A OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 \/ DSM 1053 \/ JCM 10044 \/ NBRC 100330 \/ Delta H) OX=187420 GN=rpa PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 792, "target_eno": 8.0, "alignment": { "score": 44.51, "bit_score": 41.0, "evalue": 0.0055, "pvalue": 0.0055, "n_identities": 17, "n_positives": 49, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 74, "target_from": 80, "target_to": 152, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee eeeeeeee ee", "target_secstr": "eeeeeeeee eeeeeeee eeeeeee hhhhhh eeeeee e", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL-NIQVGDEVKVS-FDIEGREWNGRW", "target_aln": "PVTGRVMKISSPRTFTTRKGREGKLANVIIADDTG---ELRAVFWTENIKLLKKFREGDVIRIKDVNIRGG-FGGRK", "middle": "++TG++++I++++++T+++G E K+++++++ ++ +++++F++++I+LL ++++GD+++++ + I+G+ ++GR+", "computed_K_ungapped": "0.1354", "computed_lambda_ungapped": "1.1529", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5795", "entropy": 0.2357, "expected_score": -0.2005, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3ULP_A Single-strand binding protein; OB-fold, DNA binding, single-stranded DNA, apicoplast, DNA BINDING PROTEIN-DNA complex; 2.1A {Plasmodium falciparum}", "query_length": 84, "query_eno": 7.0, "target_length": 124, "target_eno": 12.0, "alignment": { "score": 36.84, "bit_score": 40.9, "evalue": 0.0057, "pvalue": 0.0057, "n_identities": 10, "n_positives": 62, "n_gaps": 26, "aln_length": 108, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 115, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e eeeeeeee ee ", "target_secstr": "eeeeee eeeee eeeeeeeeee eeeeeeee ee eeeeeeeeeeeee eeeeeeee eee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETE---E------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNGR-------WFNSIRAW----RIE", "target_aln": "MLIGRVGCE--PDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIILSYNKGDLI", "middle": " ++G++++ +++ ++++G ++ + +++++ + + +++++++++++++ +DL+ ++++G++V+V+++++ R+W+++ + ++I++ +++", "computed_K_ungapped": "0.1142", "computed_lambda_ungapped": "1.0432", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5244", "entropy": 0.2064, "expected_score": -0.1964, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|B4F276|PRIB_PROMH Primosomal replication protein N OS=Proteus mirabilis (strain HI4320) OX=529507 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 105, "target_eno": 12.0, "alignment": { "score": 35.61, "bit_score": 40.9, "evalue": 0.0059, "pvalue": 0.0059, "n_identities": 19, "n_positives": 49, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeeeeeeeee eeeeeeeeee ee eeeeeeee ee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLTGTVCKALIRKVSP--AG-IPHCQFVIEHRSTQEEAGLKRQSWCRMPIIASGKALQTDTHSITVGSKVTVSGFISSHQARNGLFKLVLHAEQIE", "middle": " +TG++ + L++++ + +G ++ +FV+E++++ +++++++++G+ +++ I+VG++V+VS++I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1296", "computed_lambda_ungapped": "0.9853", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.4953", "entropy": 0.1974, "expected_score": -0.2013, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8CX55|SSB_OCEIH Single-stranded DNA-binding protein OS=Oceanobacillus iheyensis (strain DSM 14371 \/ CIP 107618 \/ JCM 11309 \/ KCTC 3954 \/ HTE831) OX=221109 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 161, "target_eno": 11.0, "alignment": { "score": 37.49, "bit_score": 40.9, "evalue": 0.0061, "pvalue": 0.0061, "n_identities": 14, "n_positives": 56, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeee hhhhhh eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTRDPDL--RYTPNG-VAVANFNIAVNRPFSNQQGNREADFINCVIWRRPAENLANYMKKGSMVGVDGRIQTRNFEGQDGKTVYVTEVVADSVQ", "middle": " ++G++++ ++ +++NG ++++F++ +++ +++ +I++++++++++ L N +++G++V+V+ +I+ R+++G +++++++A +++", "computed_K_ungapped": "0.1406", "computed_lambda_ungapped": "1.1133", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5596", "entropy": 0.2505, "expected_score": -0.2250, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3KOJ_A uncharacterized protein ycf41; single-strand binding protein family, PF00436, SNR59A, NESG, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics; HET: MSE; 1.895A {Synechococcus elongatus PCC 6301}", "query_length": 84, "query_eno": 7.0, "target_length": 108, "target_eno": 12.0, "alignment": { "score": 34.84, "bit_score": 40.8, "evalue": 0.0061, "pvalue": 0.0061, "n_identities": 10, "n_positives": 56, "n_gaps": 13, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 15, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eee eeeeeeee eeeeeeee hhhee eeeeeeeeee eeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILQATVVEA--PQLRYAQDNQTPVAEMVVQFPGLSSKDAPARLKVVGWGAVAQELQDRCRLNDEVVLEGRLRINSLLKPDGNREKQTELTVTRVH", "middle": " +++++ + +Q+ ++++++ E+V+++++ + P++++++++G+ ++L ++++DEV+++ +++ +++++ ++ +++++ R++", "computed_K_ungapped": "0.1319", "computed_lambda_ungapped": "1.0812", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5435", "entropy": 0.2282, "expected_score": -0.2058, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P46390|SSB_MYCLE Single-stranded DNA-binding protein OS=Mycobacterium leprae (strain TN) OX=272631 GN=ssb PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 168, "target_eno": 10.0, "alignment": { "score": 36.75, "bit_score": 40.8, "evalue": 0.0061, "pvalue": 0.0061, "n_identities": 11, "n_positives": 54, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhhhh eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QY----PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "TIVGNLTAD--PELRFTSSG-AAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVTGRLKQRSFETREGEKRTVVEVEVDEI", "middle": " I+G+++A ++ ++++G ++ +F + +++ ++ + ++ +++++++++++ +++G++V+V+ +++ R++++ R+ +++++ +I", "computed_K_ungapped": "0.1533", "computed_lambda_ungapped": "1.1995", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6030", "entropy": 0.3179, "expected_score": -0.2577, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3K8A_B Putative primosomal replication protein; beta-barrel, OB-fold, DNA binding protein; 2.7A {Neisseria gonorrhoeae FA 1090}", "query_length": 84, "query_eno": 7.0, "target_length": 103, "target_eno": 12.0, "alignment": { "score": 35.42, "bit_score": 40.8, "evalue": 0.0064, "pvalue": 0.0064, "n_identities": 12, "n_positives": 53, "n_gaps": 15, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 11, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeeeeeeeee hhhh eeeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNGRWFNSIRAWRIE", "target_aln": "SLAALIEKAFPIRYTP--AG-IPVLDIILKHESWQEENGQQCLVQLEIPARILGRQAEEWQYR-QGDCATVEGFLAQKSRR-SLMPMLRIQNIK", "middle": " ++++I + P+++ + +G ++ +++L +E++ + +I+++++G+ ++++ ++ +GD+++V+ +++ ++++ ++++++R+ +I+", "computed_K_ungapped": "0.1222", "computed_lambda_ungapped": "1.0324", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5190", "entropy": 0.2047, "expected_score": -0.1960, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P75542|SSB_MYCPN Single-stranded DNA-binding protein OS=Mycoplasma pneumoniae (strain ATCC 29342 \/ M129) OX=272634 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 11.0, "alignment": { "score": 37.50, "bit_score": 40.8, "evalue": 0.0065, "pvalue": 0.0065, "n_identities": 12, "n_positives": 55, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eee eeeeeeee eeeeeeee eeeee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----EQYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG---------RWFNSIRAWRIE", "target_aln": "FLFGKLSFDP--NKLQTRTN-NIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTLKPGDSVFVEGRLSTYKMNNRSDDPNSKATYALQVIADKVY", "middle": " ++GK+++ + ++++++ +F+L ++ ++ +++I+++++G++ +++ +++GD+V+V+++++ +++N+ +++++++A +++", "computed_K_ungapped": "0.1399", "computed_lambda_ungapped": "1.0890", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5474", "entropy": 0.2574, "expected_score": -0.2286, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P47337|SSB_MYCGE Single-stranded DNA-binding protein OS=Mycoplasma genitalium (strain ATCC 33530 \/ G-37 \/ NCTC 10195) OX=243273 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 160, "target_eno": 10.0, "alignment": { "score": 37.15, "bit_score": 40.7, "evalue": 0.0066, "pvalue": 0.0066, "n_identities": 13, "n_positives": 58, "n_gaps": 14, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 96, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeeeee eeeeeee hhhh eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----EQYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "FLFGKLSFTPNRLQT--KNG-TLGATFSMECLDSSGFNNAKSFIRVTAWGKVASFIVAQNPGVMLFVEGRLTTYKITNSENKNTYALQVTADKIF", "middle": " ++GK+++ ++++ KNG + +F++E++ ++++++I+++++G++ +++ ++++G++++V+++++ +++++ +++++++A +I+", "computed_K_ungapped": "0.1437", "computed_lambda_ungapped": "1.1020", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5540", "entropy": 0.2453, "expected_score": -0.2202, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|C6DE14|PRIB_PECCP Primosomal replication protein N OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 106, "target_eno": 12.0, "alignment": { "score": 35.39, "bit_score": 40.7, "evalue": 0.0069, "pvalue": 0.0069, "n_identities": 17, "n_positives": 51, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee ee eeeeeeee eeeeee eeeeeeee eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTVCKTP--IRKVSPSGI-PHCQFVLEHRSTQEEAGLSRQAWCRMPVIVSGLSSQAVTHSITVGTQLTVHGFISCHQGRNGLSKIVLHAEQIE", "middle": " ++G++++ + ++S++G+ + +FVLE++++ + +++++++G++++++ I+VG++++V+++I+ ++++ G++ + ++A +IE", "computed_K_ungapped": "0.1240", "computed_lambda_ungapped": "0.9593", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4822", "entropy": 0.1922, "expected_score": -0.2009, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "5GQO_B Single-stranded DNA-binding protein; OB fold, inter-subunit clamp, Paralogous SSB, variability, quaternary structure, DNA BINDING PROTEIN; 2.5A {Mycobacterium smegmatis (strain ATCC 700084 \/ mc(2)155)} SCOP: b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 190, "target_eno": 12.0, "alignment": { "score": 37.10, "bit_score": 40.6, "evalue": 0.0072, "pvalue": 0.0072, "n_identities": 13, "n_positives": 55, "n_gaps": 22, "aln_length": 101, "query_from": 1, "query_to": 83, "target_from": 29, "target_to": 125, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eee e eeeeeeeee eeeeeeee hhhhhh eeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----Q------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "TVVGNIITNPVRL--RF-GD-QELYKFRVASNSRRRSPEGTWEPGNSLYVTVNCWGNLARGVSASLGKGDSVVVVGHLYTNEYEDREGVRRSSVEVRATAV", "middle": " ++G+II+ +++ ++ ++ ++ +F++ +++ + +++++++++G++ +++ +++GD+V+V+++++ +E+++ R+++++RA ++", "computed_K_ungapped": "0.1344", "computed_lambda_ungapped": "1.2799", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.6434", "entropy": 0.3005, "expected_score": -0.2233, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9K5N9|SSB_ALKHC Single-stranded DNA-binding protein OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 \/ DSM 18197 \/ FERM 7344 \/ JCM 9153 \/ C-125) OX=272558 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 168, "target_eno": 10.0, "alignment": { "score": 37.14, "bit_score": 40.5, "evalue": 0.0077, "pvalue": 0.0077, "n_identities": 11, "n_positives": 57, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeee eeeeeee hhhhhhh eeeeeeeeeeeee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTRDPELR--YTPNG-VAVANFTLAVNRPFSNQQGEREADFINCVVWRKQAENVANYLKKGSLAGVDGRIQTRSYDNNEGRRVFVTEVMAESVQ", "middle": " ++G++ + +++ +++NG ++ +F+L +++ + +++I++++++++++++ +++G++++V+ +I+ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1463", "computed_lambda_ungapped": "1.1054", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5557", "entropy": 0.2668, "expected_score": -0.2398, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8EWT6|SSB_MALP2 Single-stranded DNA-binding protein OS=Malacoplasma penetrans (strain HF-2) OX=272633 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 189, "target_eno": 10.0, "alignment": { "score": 37.59, "bit_score": 40.2, "evalue": 0.0096, "pvalue": 0.0096, "n_identities": 9, "n_positives": 58, "n_gaps": 14, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 96, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeee eeeeeee hhhhh eeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "FIVGRLAQDPQQFVTQN--G-ITQSRISIASSDNWNKNETYFFPCVAWQSTANFINSYLHKGDLVAIDGKLIRRSYVSKEGKTVYVIEIVIESIK", "middle": " I+G++++ ++++ ++ G ++ ++++ +++ + +++++++++++ +++ ++ GD+V++++++++R +++ +++++I++ +I+", "computed_K_ungapped": "0.1358", "computed_lambda_ungapped": "1.0694", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5376", "entropy": 0.2481, "expected_score": -0.2269, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P0A2F6|SSB1_SALTY Single-stranded DNA-binding protein 1 OS=Salmonella typhimurium (strain LT2 \/ SGSC1412 \/ ATCC 700720) OX=99287 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 176, "target_eno": 10.0, "alignment": { "score": 36.21, "bit_score": 40.1, "evalue": 0.0099, "pvalue": 0.0099, "n_identities": 14, "n_positives": 57, "n_gaps": 21, "aln_length": 101, "query_from": 1, "query_to": 83, "target_from": 10, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee eeeeeeeeee eeeeeee hhhh eeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGQD--PEVRYMPSGG-AVANLTLATSESWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEINVPQI", "middle": "+++G++ + +++ ++++G+ ++ +++L+T+E ++++++++++FG++ +++ +++G++V+++++++ R+W++ R+ ++I++ +I", "computed_K_ungapped": "0.1429", "computed_lambda_ungapped": "1.1713", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5888", "entropy": 0.2902, "expected_score": -0.2404, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "7F5Y_A Single-stranded DNA-binding protein; DNA binding, quaternary structure, plasticity, inhibitor development, DNA BINDING PROTEIN; HET: FMT; 1.92A {Mycobacterium tuberculosis (strain ATCC 25618 \/ H37Rv)}", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 12.0, "alignment": { "score": 35.81, "bit_score": 40.1, "evalue": 0.01, "pvalue": 0.01, "n_identities": 12, "n_positives": 60, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 109, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeee eee eeeeeeee eeeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TIVGNLTA--DPELRFTPSG-AAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIG", "middle": "+I+G++ A ++++ ++++G ++ +F+++++++ + ++++++++++++++ +++G++V+VS ++++R++++ R+ +++++++I+", "computed_K_ungapped": "0.1425", "computed_lambda_ungapped": "1.2982", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6526", "entropy": 0.3047, "expected_score": -0.2281, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P66856|SSB2_TROWT Single-stranded DNA-binding protein 2 OS=Tropheryma whipplei (strain Twist) OX=203267 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 11.0, "alignment": { "score": 36.02, "bit_score": 40.1, "evalue": 0.01, "pvalue": 0.01, "n_identities": 15, "n_positives": 53, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeee ee eeeeeeee eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ------------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-RWFNSIRAWRIE", "target_aln": "TVSGLVATE--PRSFLTAEG-VHITSFRLAAQDRHFSRNANSWVSGDTNWFTVTGFRALGSNAAESISKGDRVIVYGRLRLRTWGDNKMAVEIEAESFG", "middle": " ++G++++ ++S ++++G ++ +F+L ++++ ++++++++F+++++++ I+ GD+V+V+ +++ R+W++ ++ ++I+A +++", "computed_K_ungapped": "0.1303", "computed_lambda_ungapped": "1.1137", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5598", "entropy": 0.2493, "expected_score": -0.2140, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|A8G8W5|PRIB_SERP5 Primosomal replication protein N OS=Serratia proteamaculans (strain 568) OX=399741 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 105, "target_eno": 12.0, "alignment": { "score": 34.83, "bit_score": 40.1, "evalue": 0.01, "pvalue": 0.01, "n_identities": 19, "n_positives": 47, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 99, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee ee eeeeeeee eeeeeee eeee eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "TLSGTVCKTP--TRKVSPSG-IPHCQFVLEHRSVQVEAGFTRQAWCRMPVIISGKAHQAITQSITVGTPLTVSGFISSHQGRNGLNKMVLHAEQIE", "middle": " ++G++ + ++ +S++G ++ +FVLE+++ Q + +++++++G+ ++ + I+VG++++VS++I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1239", "computed_lambda_ungapped": "0.9629", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4841", "entropy": 0.1864, "expected_score": -0.1955, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q7VMD6|PRIB_HAEDU Primosomal replication protein N OS=Haemophilus ducreyi (strain 35000HP \/ ATCC 700724) OX=233412 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 124, "target_eno": 12.0, "alignment": { "score": 35.70, "bit_score": 40.1, "evalue": 0.01, "pvalue": 0.01, "n_identities": 22, "n_positives": 49, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 17, "target_to": 109, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee e eeee eeeeeeeee eeeeeeeeeee eeee eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "TLTGIVT--SIVKQSQSPLG-IPNYSFWLEHRSNKMEVNLERQVWCKIQVILNGCQFSLITQQIKLGDKVKISGFIHTHKDYNGLSKLVLHTEQIE", "middle": "++TG+++ +++++ +S++G ++ +F+LE+++ Q + KI+++++G+ ++L+ I++GD+VK+S++I+ ++++ G++ +++++ +IE", "computed_K_ungapped": "0.1226", "computed_lambda_ungapped": "0.9998", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5026", "entropy": 0.1915, "expected_score": -0.1902, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q82XQ7|PRIB_NITEU Primosomal replication protein N OS=Nitrosomonas europaea (strain ATCC 19718 \/ CIP 103999 \/ KCTC 2705 \/ NBRC 14298) OX=228410 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 108, "target_eno": 12.0, "alignment": { "score": 34.93, "bit_score": 40.0, "evalue": 0.011, "pvalue": 0.011, "n_identities": 11, "n_positives": 59, "n_gaps": 14, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 17, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee ee eeeeeeee hhhh eeeeeeeee ee eeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNGRWFNSIRAWRIE", "target_aln": "IISGTITD--LASPRYTPAG-LMIAEFKLSHCSNQQEAGIQRRIEFEFEAIAIAETAEKIIRIGSGSNVEITGFIAKKNRL-SNQLVLHVRDTR", "middle": " I+G+I++ +++ ++++G +++EF+L++++++ ++++++++++++ +++ +I++G++V+++ +I+ ++++ ++ ++++ +++", "computed_K_ungapped": "0.1308", "computed_lambda_ungapped": "1.0218", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5136", "entropy": 0.2187, "expected_score": -0.2094, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|B0US44|PRIB_HISS2 Primosomal replication protein N OS=Histophilus somni (strain 2336) OX=228400 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 108, "target_eno": 12.0, "alignment": { "score": 34.88, "bit_score": 40.0, "evalue": 0.011, "pvalue": 0.011, "n_identities": 19, "n_positives": 49, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 13, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeee ee eeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDK-IDLL-NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "SLIGKVAD--FPKRNKSPSG-IDHCLFYLEHRSNKKEAGFTRQAWCKIAIQISGNQLIEKTQSITVGQQLLVVGFVTSHRSSNGLNQLILHAEQIE", "middle": " ++GK+ + ++++ S++G ++ +F+LE++++ ++KI ++++G++ I+++ +I+VG++++V+ ++ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1293", "computed_lambda_ungapped": "1.0179", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5117", "entropy": 0.2138, "expected_score": -0.2081, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q81JI3|SSB_BACAN Single-stranded DNA-binding protein OS=Bacillus anthracis OX=1392 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 172, "target_eno": 10.0, "alignment": { "score": 36.71, "bit_score": 40.0, "evalue": 0.011, "pvalue": 0.011, "n_identities": 11, "n_positives": 55, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee eeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGRLTKDP--DLRYTPNGV-AVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQ", "middle": " ++G++++ + +++NG+ + +F L +++ + +++I++++++++++++ +++G++++V+ +++ R+++G ++ ++++A +++", "computed_K_ungapped": "0.1430", "computed_lambda_ungapped": "1.1147", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5603", "entropy": 0.2681, "expected_score": -0.2359, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8KSB6|SSB_PAEAU Single-stranded DNA-binding protein OS=Paenarthrobacter aurescens OX=43663 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 171, "target_eno": 11.0, "alignment": { "score": 36.17, "bit_score": 39.9, "evalue": 0.011, "pvalue": 0.011, "n_identities": 10, "n_positives": 59, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeeee hhhhhhh eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVIGNLTS--DPELRFTPSGS-AVANFTIASTPRTFDRQSNEWKDGETLFLRASVWREAAENVAESLTKGTRVIVSGRLKSRSYETKEGEKRTVIELEVDEIG", "middle": " ++G++++ +++ ++++G+ ++++F + +++ + + ++++++++++++ + +++G++V+VS++++ R++++ R+ +++++ +I+", "computed_K_ungapped": "0.1496", "computed_lambda_ungapped": "1.1728", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5895", "entropy": 0.3176, "expected_score": -0.2566, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P67673|PRIB_BORPE Primosomal replication protein N OS=Bordetella pertussis (strain Tohama I \/ ATCC BAA-589 \/ NCTC 13251) OX=257313 GN=priB PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 107, "target_eno": 12.0, "alignment": { "score": 34.60, "bit_score": 39.8, "evalue": 0.013, "pvalue": 0.013, "n_identities": 13, "n_positives": 54, "n_gaps": 14, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 94, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee e eeeeeeee ee eeeeeeee eeee eeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNGRWFNSIRAWRIE", "target_aln": "ELSARVLECGAMR--HTPAG-LPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLLADTPLGTEMQVQGFLAPAR-KDSVKVKLHLQQAR", "middle": "E+++++ + +++ ++++G ++ E+ L +E+ + +++I+++++GD +LL ++++G+E++V+++++ ++ ++++ +++++ +++", "computed_K_ungapped": "0.1254", "computed_lambda_ungapped": "0.9816", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4934", "entropy": 0.1872, "expected_score": -0.1920, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "5XGT_B Single-stranded DNA-binding protein; single-strand DNA binding protein, SsbA, DNA BINDING PROTEIN; 1.82A {Staphylococcus aureus subsp. aureus} SCOP: b.40.4.0", "query_length": 84, "query_eno": 7.0, "target_length": 111, "target_eno": 12.0, "alignment": { "score": 33.87, "bit_score": 39.7, "evalue": 0.013, "pvalue": 0.013, "n_identities": 10, "n_positives": 56, "n_gaps": 18, "aln_length": 98, "query_from": 1, "query_to": 83, "target_from": 6, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eeeeeeeeee eeeeeeeeee eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "VLVGRLTKDPEYRTT--PSG-VSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSV", "middle": " ++G++ + ++++ ++G + +F L++++ + +++I++++F+++ D++ +++G++++V+++++ R++++ ++++++++ ++", "computed_K_ungapped": "0.1200", "computed_lambda_ungapped": "1.0715", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5386", "entropy": 0.2035, "expected_score": -0.1865, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8Y4X1|SSB2_LISMO Single-stranded DNA-binding protein 2 OS=Listeria monocytogenes serovar 1\/2a (strain ATCC BAA-679 \/ EGD-e) OX=169963 GN=ssb2 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 160, "target_eno": 11.0, "alignment": { "score": 36.25, "bit_score": 39.6, "evalue": 0.014, "pvalue": 0.014, "n_identities": 9, "n_positives": 58, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeeee eeeeeeee hhhh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "VLVGRLTKDPD--LRYTPAGV-AVATFTLAVNRTFTNQNGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEDNDGKRVFVTEVVAESVQ", "middle": " ++G++ + + ++++G+ + +F+L +++ + +++I++++++++++++ +++G++++V+++++ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1342", "computed_lambda_ungapped": "1.0761", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5409", "entropy": 0.2363, "expected_score": -0.2201, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q98M41|SSB_RHILO Single-stranded DNA-binding protein OS=Mesorhizobium japonicum (strain LMG 29417 \/ CECT 9101 \/ MAFF 303099) OX=266835 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 172, "target_eno": 10.0, "alignment": { "score": 36.37, "bit_score": 39.6, "evalue": 0.014, "pvalue": 0.014, "n_identities": 12, "n_positives": 55, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee eeeee eeeeeeee eeeeeeeee hhhhhhhhh eeeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILVGNLGA--DPEIRRLNSG-EPVVNIRIATSESWRDKNSGERKEKTEWHNVVIFNEGIAKVAEQYLKKGMKVYVEGQLQTRKWQDQTGADKYTTEVVLQRF", "middle": "+++G++ A ++++ ++++G + ++ ++T+E + ++++++++F++ ++ + +++G++V+V+++++ R+W++ ++ +++++ R+", "computed_K_ungapped": "0.1423", "computed_lambda_ungapped": "1.1408", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5734", "entropy": 0.2771, "expected_score": -0.2391, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9ZAQ8|SSB_CERS4 Single-stranded DNA-binding protein OS=Cereibacter sphaeroides (strain ATCC 17023 \/ DSM 158 \/ JCM 6121 \/ CCUG 31486 \/ LMG 2827 \/ NBRC 12203 \/ NCIMB 8253 \/ ATH 2.4.1.) OX=272943 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 173, "target_eno": 10.0, "alignment": { "score": 35.59, "bit_score": 39.5, "evalue": 0.016, "pvalue": 0.016, "n_identities": 15, "n_positives": 51, "n_gaps": 22, "aln_length": 101, "query_from": 1, "query_to": 82, "target_from": 9, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee ee e eeeeeeeee eeeee hhhhhhh eeeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKID-LL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWR", "target_aln": "IIIGNLGRDPEVRS--FQNG-GKVVNLRIATSEQWRDRASGERKERTEWHSVAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQSGQDRYSTEVVLRP", "middle": " I+G++ + +++S ++NG K+ ++++ T+E + ++++ +++F+++ + ++ +++G++V++++++E R+W++ R+++++++ +", "computed_K_ungapped": "0.1530", "computed_lambda_ungapped": "1.1747", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5905", "entropy": 0.3099, "expected_score": -0.2578, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P32445|RIM1_YEAST Single-stranded DNA-binding protein RIM1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 \/ S288c) OX=559292 GN=RIM1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 135, "target_eno": 11.0, "alignment": { "score": 33.64, "bit_score": 39.5, "evalue": 0.016, "pvalue": 0.016, "n_identities": 15, "n_positives": 55, "n_gaps": 14, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 23, "target_to": 114, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeee eeeeee hhhhhhh eeeeeeeeee eee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "SIVGRIGSE--FTEHTSANNN-RYLKYSIASQPRRDGQTNWYNITVFNEPQINFLTEYVRKGALVYVEADAANYVFERDDGSKGTTLSLVQKDIN", "middle": " I+G+I + ++ TS+N++ ++ ++++ +++ ++++++++++F++ +I+ L +++G++V+V++D++ +++++ ++ +S+++++I+", "computed_K_ungapped": "0.1406", "computed_lambda_ungapped": "1.2568", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6318", "entropy": 0.2938, "expected_score": -0.2235, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8VMM4|SSB2_PSEPU Single-stranded DNA-binding protein OS=Pseudomonas putida OX=303 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 180, "target_eno": 10.0, "alignment": { "score": 35.65, "bit_score": 39.4, "evalue": 0.016, "pvalue": 0.016, "n_identities": 12, "n_positives": 53, "n_gaps": 18, "aln_length": 97, "query_from": 1, "query_to": 81, "target_from": 9, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeeee eeeeeeeeee eeeeeee hhhhh eeeeeeeeeeeee eeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET---E---E---QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWN--G--RWFNSIRAW", "target_aln": "ILVGTCGQDPEVRYL--PNGNAVTNLSLATSEQWTDKQTGQKVERTEWHRVSLFGKVAEIAGEYLRKGSQCYIEGKLQTREWEKDGIKRYTTEIIVD", "middle": " ++G++++ ++++ +NG ++ + +++++ + + + ++++ +++FG++++ + + ++ G++++++++++ REW+ G R+ ++I++ ", "computed_K_ungapped": "0.1440", "computed_lambda_ungapped": "1.1709", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5886", "entropy": 0.2823, "expected_score": -0.2322, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q83N34|SSB1_TROWT Single-stranded DNA-binding protein 1 OS=Tropheryma whipplei (strain Twist) OX=203267 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 186, "target_eno": 10.0, "alignment": { "score": 36.15, "bit_score": 39.4, "evalue": 0.016, "pvalue": 0.016, "n_identities": 9, "n_positives": 57, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeee hh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------Q----YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVVGNLTADPELRYT--ATG-AAVVNMTIASTPRMYDRQSGEWKDGEPLFLRGILWREYAINAAASLAKGMRVVAVGKLKQRNYETREGDRRTSVELEIDEIG", "middle": " ++G+++A ++++ ++G ++ ++ + +++ + P ++++++++++ +++ +++G++V+++++++ R++++ R+ +++++ +I+", "computed_K_ungapped": "0.1455", "computed_lambda_ungapped": "1.1536", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5799", "entropy": 0.2866, "expected_score": -0.2390, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q890K1|SSB_LACPL Single-stranded DNA-binding protein OS=Lactobacillus plantarum (strain ATCC BAA-793 \/ NCIMB 8826 \/ WCFS1) OX=220668 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 200, "target_eno": 8.0, "alignment": { "score": 36.79, "bit_score": 39.4, "evalue": 0.016, "pvalue": 0.016, "n_identities": 9, "n_positives": 59, "n_gaps": 18, "aln_length": 99, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 101, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeeee hhhhhh eeeeeeeeee eeeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILVGRLTRDPELRYTN--GG-AAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAENFANFTHKGSLVGIDGRIQTRNYENQQGVRVYVTEVVVENFS", "middle": " ++G++++ ++++++ +G ++ +F++ +++ + +++I+++++++ ++ + N +++G++V+++++I+ R +++ ++ +++++ +++", "computed_K_ungapped": "0.1526", "computed_lambda_ungapped": "1.1412", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5737", "entropy": 0.3029, "expected_score": -0.2621, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P49536|YCF41_TRICV Putative single-stranded DNA-binding protein ycf41 OS=Trieres chinensis OX=1514140 GN=ycf41 PE=4 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 113, "target_eno": 12.0, "alignment": { "score": 34.73, "bit_score": 39.4, "evalue": 0.016, "pvalue": 0.016, "n_identities": 10, "n_positives": 56, "n_gaps": 17, "aln_length": 97, "query_from": 1, "query_to": 83, "target_from": 5, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e eeeeeeeeee", "target_secstr": "eeeeeee eeee eeeeeeeeeeee eeeeee eeee eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNGR-------WFNSIRAWRI", "target_aln": "SFIIKIIKKPKQSFFEK--E-ISLTEISGKLYQIRNKKKIEIPVSLSLWGNLAYDTMQYYHINDYVIVEGYVSLRDKISSGYQIPVDKHIEVSGFKI", "middle": "++++KII+ ++++ ++ + + E+++ ++ ++ +++++++++G+ ++ + ++++D+V+V+++++ R+++++ + +++++ +I", "computed_K_ungapped": "0.1182", "computed_lambda_ungapped": "0.9910", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4982", "entropy": 0.1801, "expected_score": -0.1813, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9PPT7|SSB_UREPA Single-stranded DNA-binding protein OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) OX=273119 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 166, "target_eno": 10.0, "alignment": { "score": 35.76, "bit_score": 39.3, "evalue": 0.018, "pvalue": 0.018, "n_identities": 10, "n_positives": 57, "n_gaps": 14, "aln_length": 95, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 96, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeeee eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "ILIGNLVR--DPEARQIPSG-RLVTNFTIAVNDNTPNANANFIRCVAWNNQANFLTTYLKKGDAIAIEGRIVSRSYVDNNGKTNYVTEVYADQVQ", "middle": " ++G++ + +++ ++++G ++ +F + ++++ +++I+++++++ +++L +++GD+++++++I+ R++++ ++ ++++A +++", "computed_K_ungapped": "0.1232", "computed_lambda_ungapped": "1.0503", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5280", "entropy": 0.2250, "expected_score": -0.2106, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P54622|SSBP_DROME Single-stranded DNA-binding protein, mitochondrial OS=Drosophila melanogaster OX=7227 GN=mtSSB PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 146, "target_eno": 10.0, "alignment": { "score": 34.33, "bit_score": 39.2, "evalue": 0.019, "pvalue": 0.019, "n_identities": 15, "n_positives": 53, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 42, "target_to": 139, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeeeeeee eeeeeee hhhhh eeeeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TILGRVGADPQLRGSQ---E-HPVVTFSVATHTNYKYENGDWAQRTDWHRVVVFKPNLRDTVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTSIIADDVL", "middle": " I+G+++A ++++ + + + +F+++T++ Q ++++++++F++ ++D++ +++G++++V+++I+ +E+++ ++ +SI+A +++", "computed_K_ungapped": "0.1384", "computed_lambda_ungapped": "1.2129", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6097", "entropy": 0.3005, "expected_score": -0.2334, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "4FDB_A Probable primosomal replication protein n; Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, REPLICATION; HET: MSE; 1.8A {Ralstonia solanacearum}", "query_length": 84, "query_eno": 7.0, "target_length": 101, "target_eno": 11.0, "alignment": { "score": 32.86, "bit_score": 39.1, "evalue": 0.02, "pvalue": 0.02, "n_identities": 8, "n_positives": 47, "n_gaps": 13, "aln_length": 82, "query_from": 1, "query_to": 72, "target_from": 6, "target_to": 84, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeee eeeeeeeeee hhhhhhhh eeeeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNG", "target_aln": "QLVATLVEREVMRYTPA--G-VPIVNCLLSYSGQAMEAQTARQVEFSIEALGAGKMASVLDRIAPGTVLDCVGFLARKHRSS", "middle": " +++++++ ++++ ++ G ++ ++ L +++ Q + +I+++++G+ ++L +I++G++++++ +++ +++++", "computed_K_ungapped": "0.1277", "computed_lambda_ungapped": "1.0801", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5429", "entropy": 0.2305, "expected_score": -0.2089, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9KYI9|SSB1_STRCO Single-stranded DNA-binding protein 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 \/ A3(2) \/ M145) OX=100226 GN=ssb1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 156, "target_eno": 10.0, "alignment": { "score": 34.86, "bit_score": 39.1, "evalue": 0.021, "pvalue": 0.021, "n_identities": 16, "n_positives": 49, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 84, "target_from": 7, "target_to": 104, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeee eeeee eeeeeee hh eeeeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAWRIE", "target_aln": "CAVGNVATT--PVFRDLANG--PSVRFRLAVTARYWDREKNAWTDGHTNFFTVWANRQLATNASGSLAVGDPVVVQGRLKVRTDVREGQSRTSADIDAVAIG", "middle": "+++G++ + +++++++NG +F L +++ + +++++++++++ ++ + +++VGD+V+V+ +++ R ++ G R+ ++I+A +I+", "computed_K_ungapped": "0.1530", "computed_lambda_ungapped": "1.1825", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5944", "entropy": 0.3056, "expected_score": -0.2398, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9KUZ1|PRIB_VIBCH Primosomal replication protein N OS=Vibrio cholerae serotype O1 (strain ATCC 39315 \/ El Tor Inaba N16961) OX=243277 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 100, "target_eno": 12.0, "alignment": { "score": 33.70, "bit_score": 39.0, "evalue": 0.022, "pvalue": 0.022, "n_identities": 16, "n_positives": 50, "n_gaps": 15, "aln_length": 95, "query_from": 1, "query_to": 83, "target_from": 6, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeeeeeeee eeeeeeeee eeeeeeeeeee eee eeeeeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ---------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-RWFNSIRAWRI", "target_aln": "ELSGVVAKALVRSQSP--SG-VKHCHFWLEHRSTMVEADLPRQVFCRLPVVVSGARSEALTQNLVQGSSILVSGFLAYQTSRNGVGKLVLHADKI", "middle": "E++G++ + L++++ + +G K+ +F LE+++ ++ +++++++G+++++L N+++G++++VS +++ +++++ ++ ++A +I", "computed_K_ungapped": "0.1294", "computed_lambda_ungapped": "0.9885", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.4969", "entropy": 0.2056, "expected_score": -0.2073, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q1XDQ0|YCF41_NEOYE Putative single-stranded DNA-binding protein ycf41 OS=Neopyropia yezoensis OX=2788 GN=ycf41 PE=4 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 111, "target_eno": 12.0, "alignment": { "score": 34.19, "bit_score": 38.8, "evalue": 0.024, "pvalue": 0.024, "n_identities": 7, "n_positives": 61, "n_gaps": 13, "aln_length": 93, "query_from": 1, "query_to": 83, "target_from": 5, "target_to": 94, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeeeeeeeeeee eeeeeeeeeee eeeeeeeee hh eeeeeeeeee eee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWN-----G--RWFNSIRAWRI", "target_aln": "TLLVQILSCKSIRISEN--K-SQIIKLKARLLKRKRLVIINLTIWNKKSSYTFKQLKKLDYVIIEGKLHRNNKIFTNKTKQVGKDLVFSTSRI", "middle": " ++++I++ ++++ ++ + ++ ++++++++ + +++I+++++++K +++ + ++++D+V+++++++ + ++ + ++ +++++ RI", "computed_K_ungapped": "0.1272", "computed_lambda_ungapped": "0.9846", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4949", "entropy": 0.1874, "expected_score": -0.1900, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O14087|RIM1_SCHPO Single-stranded DNA-binding protein rim1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 \/ ATCC 24843) OX=284812 GN=rim1 PE=2 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 150, "target_eno": 11.0, "alignment": { "score": 34.22, "bit_score": 38.8, "evalue": 0.026, "pvalue": 0.025, "n_identities": 13, "n_positives": 58, "n_gaps": 16, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 29, "target_to": 122, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eee ee eeeeeeeee eeeee hhhh eeeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---QYPKKICFEFFGDK-IDLL--NIQVGDEVKVSFDIEGREWNG-------RWFNSIRAWRIE", "target_aln": "TLTGNLTKDVERL--QSQKG-NEYMRYTVASNNGKDVAPTFHSVYVFDSYNFDRLQTILRKGTRVYVEADAVWRSVPAGNEGSQAKMSLRHVSADVL", "middle": "++TG++++ +++ +S++G + +++++ +++ + P+++ +++F+++ +D+L ++++G++V+V++D++ R++++ ++ +++++ +++", "computed_K_ungapped": "0.1406", "computed_lambda_ungapped": "1.1890", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5977", "entropy": 0.2680, "expected_score": -0.2177, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|A1JIS9|PRIB_YERE8 Primosomal replication protein N OS=Yersinia enterocolitica serotype O:8 \/ biotype 1B (strain NCTC 13174 \/ 8081) OX=393305 GN=priB PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 106, "target_eno": 12.0, "alignment": { "score": 33.57, "bit_score": 38.7, "evalue": 0.027, "pvalue": 0.026, "n_identities": 18, "n_positives": 50, "n_gaps": 19, "aln_length": 98, "query_from": 1, "query_to": 84, "target_from": 8, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeee eeeeeeee ee eeeeeeeeeeeee eee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-G--RWFNSIRAWRIE", "target_aln": "VLSGTVCKTPVRK--VSPSG-IPHCQFVLEHRSTQQEAGFSRQTWCRMPIIVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKL--VLHAEQIE", "middle": " ++G++++ +++ +S++G ++ +FVLE+++ + + +++++++G+ +++L I+VG++++V+++I+ ++++ G ++ +++A +IE", "computed_K_ungapped": "0.1228", "computed_lambda_ungapped": "0.9593", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.4822", "entropy": 0.1951, "expected_score": -0.2050, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8UF87|SSB_AGRFC Single-stranded DNA-binding protein OS=Agrobacterium fabrum (strain C58 \/ ATCC 33970) OX=176299 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 173, "target_eno": 10.0, "alignment": { "score": 35.42, "bit_score": 38.6, "evalue": 0.028, "pvalue": 0.028, "n_identities": 11, "n_positives": 54, "n_gaps": 22, "aln_length": 101, "query_from": 1, "query_to": 82, "target_from": 9, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee ee eeeeeeeee eeeeeeee eeeeee eeeeeeee eee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWR", "target_aln": "ILIGNVGAD--PEIRRTQDGR-PIANLRIATSETWRDRNSGERKEKTEWHTVVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQTGNDRYSTEIVLQG", "middle": " ++G++ A ++ ++++G+ + ++ + T+E ++++++++++F++ ++++ +++G++++++++++ R+W++ R+ ++I++ +", "computed_K_ungapped": "0.1434", "computed_lambda_ungapped": "1.1052", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5556", "entropy": 0.2672, "expected_score": -0.2406, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P28042|SSBP_RAT Single-stranded DNA-binding protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ssbp1 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 151, "target_eno": 12.0, "alignment": { "score": 34.11, "bit_score": 38.5, "evalue": 0.031, "pvalue": 0.031, "n_identities": 15, "n_positives": 54, "n_gaps": 27, "aln_length": 108, "query_from": 1, "query_to": 84, "target_from": 34, "target_to": 138, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeee eeeeee eeee eeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "QLLGRVGQDPVMRQVE--GK-NPVTIFSLATNEMWRSGDNEAYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNNVRRQATTIIADNII", "middle": "+++G++++ ++++ + ++ + +F+L+T+E Q ++++++++F++ + D++ +++G++++V+++++ +E+++ R+ ++I+A +I+", "computed_K_ungapped": "0.1279", "computed_lambda_ungapped": "1.2237", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.6151", "entropy": 0.2609, "expected_score": -0.2044, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q82FG5|SSB1_STRAW Single-stranded DNA-binding protein 1 OS=Streptomyces avermitilis (strain ATCC 31267 \/ DSM 46492 \/ JCM 5070 \/ NBRC 14893 \/ NCIMB 12804 \/ NRRL 8165 \/ MA-4680) OX=227882 GN=ssb1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 202, "target_eno": 9.0, "alignment": { "score": 35.32, "bit_score": 38.3, "evalue": 0.035, "pvalue": 0.034, "n_identities": 10, "n_positives": 59, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeee eeeeeeee eeeeeee hhhhhhhh eeeeeeeeee ee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN---G--RWFNSIRAWRI", "target_aln": "TVVGNLVD--DPELRFTPSGA-AVAKFRVASTPRTFDRQTNEWKDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEV", "middle": "+++G++ + +++ ++++G+ ++++F + +++ + + ++++++++++++++ +Q+G++V+V+++++ R+++ G R+ +++++ ++", "computed_K_ungapped": "0.1619", "computed_lambda_ungapped": "1.2131", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6098", "entropy": 0.3583, "expected_score": -0.2768, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q889U1|SSB_PSESM Single-stranded DNA-binding protein OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 \/ DC3000) OX=223283 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 189, "target_eno": 8.0, "alignment": { "score": 34.68, "bit_score": 38.1, "evalue": 0.04, "pvalue": 0.039, "n_identities": 17, "n_positives": 49, "n_gaps": 20, "aln_length": 98, "query_from": 1, "query_to": 81, "target_from": 9, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eeeeeeee eeeeeee eee eeeeeeeee eeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ-----------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN--G--RWFNSIRAW", "target_aln": "ILVGTCGQD--PEVRYLPNGN-AVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVD", "middle": "+++G++ + +++ +++NG+ +++++L T+EQ + ++++++FG++++++ ++ G++V+++++++ REW+ G R+ ++I++ ", "computed_K_ungapped": "0.1541", "computed_lambda_ungapped": "1.2249", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6157", "entropy": 0.3176, "expected_score": -0.2487, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q9CYR0|SSBP_MOUSE Single-stranded DNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Ssbp1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 152, "target_eno": 11.0, "alignment": { "score": 33.64, "bit_score": 38.1, "evalue": 0.041, "pvalue": 0.04, "n_identities": 13, "n_positives": 62, "n_gaps": 27, "aln_length": 108, "query_from": 1, "query_to": 84, "target_from": 34, "target_to": 138, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeeeee eeeeeee eeeeeee hhhhhh eeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-----E-----------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "QLLGRVGQD--PVMRQVEGKN-PVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNNVRRQATTIIAGKKL", "middle": "+++G++++ ++++++++++ ++ +F+L+T+ + Q ++++++++F++ ++D + ++++G+++ V+++++++E+++ R++++I+A +++", "computed_K_ungapped": "0.1361", "computed_lambda_ungapped": "1.2231", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.6148", "entropy": 0.2619, "expected_score": -0.2052, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P34496|MTSS1_CAEEL Single-stranded DNA-binding protein, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=mtss-1 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 170, "target_eno": 10.0, "alignment": { "score": 34.19, "bit_score": 38.0, "evalue": 0.043, "pvalue": 0.042, "n_identities": 16, "n_positives": 53, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 58, "target_to": 157, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN----G---RWFNSIRAWRIE", "target_aln": "ELVGGVALDPLYKTG--RNG-KPYLIFNIITNSYFKQQDGTTLDQTERHAVSVFGKQAEILSKTIKKGSRLMVQGRLHYSGGQKDEQGNRTQRNTYIIAQTVQ", "middle": "E++G++++ ++++G +NG ++ +F+++T++ + ++++ +++FG+ ++ L I++G++++V+ +++ ++++ G +++++I+A +++", "computed_K_ungapped": "0.1499", "computed_lambda_ungapped": "1.2092", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6078", "entropy": 0.2926, "expected_score": -0.2339, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P03672|G5P_BPPF3 DNA-Binding protein G5P OS=Pseudomonas phage Pf3 OX=10872 GN=V PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 78, "target_eno": 7.0, "alignment": { "score": 30.76, "bit_score": 38.0, "evalue": 0.043, "pvalue": 0.042, "n_identities": 13, "n_positives": 30, "n_gaps": 8, "aln_length": 58, "query_from": 4, "query_to": 59, "target_from": 3, "target_to": 54, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": "eeeeeee eeee eeeeeeeeee eeeeeee ee", "target_secstr": "eeeeeeeeeee eeeeeeeeee eeeeee eeee", "query_aln": "GKIIAILPEQSGTSKNG-EWKKQEFVLETEE-QYPKKICFEFFGDKIDLLNIQVGDEV", "target_aln": "IQITFTDSVRQGTSAKGNPYTFQEGFLHLEDKPFPLQCQFFVE------SVIPAGSYQ", "middle": " +I+ ++++++GTS++G ++++QE++L++E+ ++P+++ F++ I++G+ +", "computed_K_ungapped": "0.1559", "computed_lambda_ungapped": "1.0122", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.5088", "entropy": 0.2847, "expected_score": -0.2780, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q97W73|SSB_SACS2 Single-stranded DNA binding protein Ssb OS=Saccharolobus solfataricus (strain ATCC 35092 \/ DSM 1617 \/ JCM 11322 \/ P2) OX=273057 GN=ssb PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 11.0, "alignment": { "score": 33.76, "bit_score": 37.8, "evalue": 0.05, "pvalue": 0.049, "n_identities": 12, "n_positives": 51, "n_gaps": 8, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 16, "target_to": 82, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee eeeeeeee e", "target_secstr": "eeeeeee hhhh eeeeeeee eeeeeee eeeee eeee e", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVS-FDIEGREWNGR", "target_aln": "NVTVRVLEASEARQIQTKNGVRTISEAIVGDETG---RVKLTLWGKHAG--SIKEGQVVKIENAWTT--AFKGQ", "middle": "++T++++++++++++++KNG+++++E++++ E+ +++++++G++++ +I++G++VK++ + ++ +++G+", "computed_K_ungapped": "0.1144", "computed_lambda_ungapped": "1.1279", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.5670", "entropy": 0.2211, "expected_score": -0.1931, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P56898|SSB_RHIME Single-stranded DNA-binding protein OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 174, "target_eno": 10.0, "alignment": { "score": 34.59, "bit_score": 37.8, "evalue": 0.051, "pvalue": 0.05, "n_identities": 8, "n_positives": 62, "n_gaps": 20, "aln_length": 101, "query_from": 1, "query_to": 83, "target_from": 9, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeee eeeeeeeee eeeeeeee eeeeeee eeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET---E---E---QYPKKICFEFFGDKID-LL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "ILIGNVGA--DPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQTGNDRYSTEVVLQGF", "middle": "+++G++ A +++ ++++G ++ + +++++ + + ++++++++++F+++ + ++ +++G++++++++++ R+W++ R+ +++++ ++", "computed_K_ungapped": "0.1390", "computed_lambda_ungapped": "1.1336", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5699", "entropy": 0.2718, "expected_score": -0.2351, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|Q8NLG0|SSB_CORGL Single-stranded DNA-binding protein OS=Corynebacterium glutamicum (strain ATCC 13032 \/ DSM 20300 \/ BCRC 11384 \/ JCM 1318 \/ LMG 3730 \/ NCIMB 10025) OX=196627 GN=ssb PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 225, "target_eno": 5.0, "alignment": { "score": 32.89, "bit_score": 37.7, "evalue": 0.052, "pvalue": 0.051, "n_identities": 11, "n_positives": 59, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 108, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeeee hhhhhhh eeeeeeeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVVGNIVADPELR--FTPSG-AAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVG", "middle": "+++G+I A +++ ++++G ++++F++ +++ + + ++++++++++++++ ++++G++V V+++++ R++++ R+ ++++A +++", "computed_K_ungapped": "0.1594", "computed_lambda_ungapped": "1.2778", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6423", "entropy": 0.3841, "expected_score": -0.2697, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "4DAM_E Single-stranded DNA-binding protein 1; OB-fold, DNA-binding, single-stranded DNA, DNA BINDING PROTEIN; 1.7A {Streptomyces coelicolor} SCOP: b.40.4.0, l.1.1.1", "query_length": 84, "query_eno": 7.0, "target_length": 128, "target_eno": 11.0, "alignment": { "score": 32.98, "bit_score": 37.6, "evalue": 0.056, "pvalue": 0.054, "n_identities": 13, "n_positives": 57, "n_gaps": 18, "aln_length": 100, "query_from": 1, "query_to": 84, "target_from": 19, "target_to": 116, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeeee eeee eeeeeeeeee ee eeeeeee eeeeeeeeee eee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLET---EEQ-------YPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWRIE", "target_aln": "CAVGNVAT--TPVFRDLANGPSVRFRLAVTARYWDREKNAWTDGHTNFFTVWANRQLATNASGSLAVGDPVVVQGRLKVRTDVREGQSRTSADIDAVAIG", "middle": "+++G++ + +++ +++NG++ + ++++++ +++ ++++++++++++ +++ ++VGD+V+V+ +++ R++++ R+ ++I+A +I+", "computed_K_ungapped": "0.1382", "computed_lambda_ungapped": "1.1173", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5616", "entropy": 0.2304, "expected_score": -0.2018, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P18310|SSBF_ECOLI Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli (strain K12) OX=83333 GN=ssbF PE=3 SV=3", "query_length": 84, "query_eno": 7.0, "target_length": 179, "target_eno": 10.0, "alignment": { "score": 33.88, "bit_score": 37.6, "evalue": 0.059, "pvalue": 0.057, "n_identities": 13, "n_positives": 51, "n_gaps": 20, "aln_length": 99, "query_from": 1, "query_to": 82, "target_from": 10, "target_to": 105, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeee", "target_secstr": "eeeeee ee eeeeeeeeee eeeeee hhhhhhh ee eeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG----RWFNSIRAWR", "target_aln": "ILVGRLGKDP--EVRYIPNG-GAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGECLRKGAQVYIEGQLRTRSWEDNGITRYVTEILVKT", "middle": "+++G++ + + +++NG +++++ ++T+E + ++++++++FG+ +++ ++ G++V+++++++ R+W++ R+ ++I++ +", "computed_K_ungapped": "0.1443", "computed_lambda_ungapped": "1.1584", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5823", "entropy": 0.2836, "expected_score": -0.2372, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "4DNI_A Fusion protein of RNA-editing complex proteins MP42 and MP18; KREPA3, KREPA6, Editosome, Protein\/RNA binding, PROTEIN BINDING, RNA BINDING PROTEIN; 2.55A {Trypanosoma brucei}", "query_length": 84, "query_eno": 7.0, "target_length": 257, "target_eno": 9.0, "alignment": { "score": 37.00, "bit_score": 37.6, "evalue": 0.059, "pvalue": 0.057, "n_identities": 12, "n_positives": 47, "n_gaps": 19, "aln_length": 86, "query_from": 1, "query_to": 72, "target_from": 150, "target_to": 230, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeee e ee eeeeeeeeeeee eeee eeeeeee hhhhh eeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKI-DLL--NIQVGDEVKVSFDIEGREWNG", "target_aln": "TLVGVV---HDIQSGFVYE--DAVTQFTLTTTSIDTTHPTQEVVVEKDHHTIRCFGELFSAEVKQKVKEGNVVCVNGRLRLSPQLE", "middle": "+++G++ ++QSG++++ ++ +F+L T++ + ++++++++FG++ +++ +++G++V+V+ +++++++++", "computed_K_ungapped": "0.1219", "computed_lambda_ungapped": "1.0364", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5210", "entropy": 0.2157, "expected_score": -0.2013, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "4DKA_D RNA-editing complex protein MP81; KREPA1, VHH, Single domain antibody, PROTEIN BINDING, RNA BINDING PROTEIN-IMMUNE SYSTEM complex; 1.97A {Lama glama}", "query_length": 84, "query_eno": 7.0, "target_length": 105, "target_eno": 12.0, "alignment": { "score": 32.49, "bit_score": 37.5, "evalue": 0.06, "pvalue": 0.059, "n_identities": 15, "n_positives": 43, "n_gaps": 12, "aln_length": 78, "query_from": 1, "query_to": 71, "target_from": 7, "target_to": 79, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeee eeee eeeeeeeeee eeeeeeeee hhhhhh eeeeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE---EQYPKKICFEFFGDKI--DLL--NIQVGDEVKVSFDIEGREWN", "target_aln": "LMIGRIA---DVQHGFLG-A-MTVTQYVLEVDGGASGEKEFIVIRCMGDNFPASLLKDQVKLGSRVLVQGTLRMNRHV", "middle": "+++G+I ++Q+G+++ + ++ ++VLE++ ++ +++I+++++GD+ +LL +++G++V+V++ ++ ++++", "computed_K_ungapped": "0.1281", "computed_lambda_ungapped": "1.0334", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5195", "entropy": 0.2191, "expected_score": -0.2067, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9X8U3|SSB2_STRCO Single-stranded DNA-binding protein 2 OS=Streptomyces coelicolor (strain ATCC BAA-471 \/ A3(2) \/ M145) OX=100226 GN=ssb2 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 199, "target_eno": 9.0, "alignment": { "score": 34.24, "bit_score": 37.3, "evalue": 0.073, "pvalue": 0.071, "n_identities": 9, "n_positives": 57, "n_gaps": 22, "aln_length": 102, "query_from": 1, "query_to": 83, "target_from": 8, "target_to": 106, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeeee ee eeeeeeeee eeeeeee hhhhhhh eeeeeeeeee eeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------------QYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "TVVGNLVDDPELRFTP--SG-AAVAKFRVASTPRTFDRQTNEWKDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEV", "middle": "+++G++++ ++++ + +G ++ +F++ +++ + + ++++++++++++++ +Q G++V+V+ +++ R++++ R+ +++++ ++", "computed_K_ungapped": "0.1623", "computed_lambda_ungapped": "1.2244", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6155", "entropy": 0.3491, "expected_score": -0.2683, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3FHW_A Primosomal replication protein n; priB BpR162 X-RAY NESG, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, DNA replication; HET: MSE; 1.9A {Bordetella parapertussis}", "query_length": 84, "query_eno": 7.0, "target_length": 115, "target_eno": 12.0, "alignment": { "score": 32.11, "bit_score": 37.2, "evalue": 0.074, "pvalue": 0.071, "n_identities": 13, "n_positives": 54, "n_gaps": 14, "aln_length": 94, "query_from": 1, "query_to": 84, "target_from": 5, "target_to": 94, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eee eeeeeeeeeeeee eeeeeeeee hhhhhh eeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGREWNGRWFNSIRAWRIE", "target_aln": "ELSARVLE--CGAMRHTPAG-LPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLLADTPLGTEMQVQGFLAPARKDS-VKVKLHLQQAR", "middle": "E+++++ + +++ +++G ++ E++L++E+ + + +I+++++GD +LL ++++G+E++V+ +++ + +++ +++++++++++", "computed_K_ungapped": "0.1309", "computed_lambda_ungapped": "1.0806", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5432", "entropy": 0.2117, "expected_score": -0.1941, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "2K50_A Replication factor A related protein; uncharacterized protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, unknown function; NMR {Methanothermobacter thermautotrophicus str. Delta H}", "query_length": 84, "query_eno": 7.0, "target_length": 115, "target_eno": 13.0, "alignment": { "score": 32.25, "bit_score": 37.2, "evalue": 0.079, "pvalue": 0.076, "n_identities": 17, "n_positives": 49, "n_gaps": 7, "aln_length": 78, "query_from": 1, "query_to": 75, "target_from": 20, "target_to": 93, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeee eeeeeee eee", "target_secstr": "eee eeeee eeeeeeee eeeeeee hhh eeeeeeeee ee", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL-NIQVGDEVKVSF-DIEGREWNGRWF", "target_aln": "PVTGRVMKISSPRTFTTRKGREGKLANVIIADDTG---ELRAVFWTENIKLLKKFREGDVIRIKDVNIRGG-FGGRKE", "middle": "++TG++++I++++++T+++G E K+++++++ +++ +++++F++++I+LL ++++GD+++++ I+G+ ++GR+ ", "computed_K_ungapped": "0.1342", "computed_lambda_ungapped": "1.1191", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5626", "entropy": 0.2179, "expected_score": -0.1912, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "1V1Q_A PRIMOSOMAL REPLICATION PROTEIN N; PRIMOSOME, DNA REPLICATION, DNA BINDING; HET: CYS; 2.1A {ESCHERICHIA COLI} SCOP: b.40.4.3, l.1.1.1", "query_length": 84, "query_eno": 7.0, "target_length": 134, "target_eno": 12.0, "alignment": { "score": 32.58, "bit_score": 37.0, "evalue": 0.089, "pvalue": 0.085, "n_identities": 17, "n_positives": 51, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 23, "target_to": 115, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeeee eeeeeeee eee eeeeeeeee eeeeee eeeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYP---------KKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTVCRAPLRK--VSPSG-IPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIE", "middle": " ++G++++ ++ +S++G ++ +FVLE+++ ++ ++++++++G++ +++ I+VG++++V+++I+ ++++ G++ +++A +IE", "computed_K_ungapped": "0.1240", "computed_lambda_ungapped": "1.1251", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5656", "entropy": 0.2284, "expected_score": -0.1991, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "sp|P18022|SSBP_ECOLX Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=3", "query_length": 84, "query_eno": 7.0, "target_length": 175, "target_eno": 10.0, "alignment": { "score": 34.11, "bit_score": 36.8, "evalue": 0.099, "pvalue": 0.094, "n_identities": 13, "n_positives": 50, "n_gaps": 20, "aln_length": 97, "query_from": 1, "query_to": 80, "target_from": 10, "target_to": 103, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeee", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhh eeeeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-----------QYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG----RWFNSIRA", "target_aln": "ILVGRLGN--DPEVRYIPNG-GAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWDDNGITRYITEILV", "middle": " ++G++ + ++++ ++NG ++ ++++ T+E + ++++++++FG++ +++ + ++ G++V ++ +++ R+W++ R+ ++I++", "computed_K_ungapped": "0.1443", "computed_lambda_ungapped": "1.1320", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5690", "entropy": 0.2835, "expected_score": -0.2430, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "2HQL_F Hypothetical protein MG376 homolog; Structural genomics, conserved hypothetical protein, Mycoplasma pneumoniae, GI:1673959, MPN554, MG376, OB fold, Single-stranded DNA binding protein; 2.0A {Mycoplasma pneumoniae}", "query_length": 84, "query_eno": 7.0, "target_length": 110, "target_eno": 12.0, "alignment": { "score": 32.45, "bit_score": 36.7, "evalue": 0.11, "pvalue": 0.1, "n_identities": 8, "n_positives": 50, "n_gaps": 22, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 12, "target_to": 97, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee e eee eeeeeeeeeeee eeeeeeee ee eeeeeeeeeee eeeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-------EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG---RWFNSIRAWRIE", "target_aln": "FLEGEIESS----CWSV-KK----TGFLVTIKQMRFFGERLFTDYYVIYANGQLAYELEKHTKKYKTISIEGILRTYL-ERKSEIWKTTIEIVKIF", "middle": " ++G+I + + ++ ++ +F+++++ ++ +++++++++G+ ++L +++++++ ++ ++ ++ ++ +W + I++ +I+", "computed_K_ungapped": "0.1245", "computed_lambda_ungapped": "1.0267", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5161", "entropy": 0.2000, "expected_score": -0.1933, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8FLP9|SSB_COREF Single-stranded DNA-binding protein OS=Corynebacterium efficiens (strain DSM 44549 \/ YS-314 \/ AJ 12310 \/ JCM 11189 \/ NBRC 100395) OX=196164 GN=ssb PE=3 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 232, "target_eno": 4.0, "alignment": { "score": 32.19, "bit_score": 36.6, "evalue": 0.12, "pvalue": 0.11, "n_identities": 9, "n_positives": 62, "n_gaps": 22, "aln_length": 103, "query_from": 1, "query_to": 84, "target_from": 9, "target_to": 108, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee ee eeeeeeeee eeeeeeee hhhhhhhh eeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY------------PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRIE", "target_aln": "TVVGNLVA--DPELRFTPSG-AAVANFRIASTPRTFNRTTNQWEDGEGLFLTCNVWREAAENVAESLTKGMRVIVQGRLRQRSYETREGEKRTIFEVEVDDVG", "middle": "+++G++ A +++++++++G ++++F++ +++++ ++++ ++++++ ++ + +++G++V+V+++++ R++++ R+ +++++ +++", "computed_K_ungapped": "0.1345", "computed_lambda_ungapped": "1.2928", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.6498", "entropy": 0.3377, "expected_score": -0.2304, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O43952|TGP1_TETTH G-quartet DNA-binding protein TGP1 OS=Tetrahymena thermophila OX=5911 GN=TGP1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 725, "target_eno": 2.0, "alignment": { "score": 38.19, "bit_score": 36.4, "evalue": 0.13, "pvalue": 0.12, "n_identities": 13, "n_positives": 49, "n_gaps": 16, "aln_length": 85, "query_from": 1, "query_to": 74, "target_from": 300, "target_to": 379, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eee e eeeeeeeeee eeeeeee eeeee eeeee eee ee", "target_secstr": "eeeeeeeeee eeeeeeee eeeeeeee eeeeeeeeee ee", "query_aln": "EITGKIIAIL-PEQSG-TSKNG---EWKKQEFVLETEEQYPKKICFEFFGD-KIDLLNIQVGDEVKVS-FDIEG----REWNGRW", "target_aln": "TVIGKIVSLRTEDKSLPAKQDGTSTTMVYLKGTIGDE---TGVIDFDMAEKRDCPR--FKENDVVKFTSVMNKGRQSAEGKVGGH", "middle": " ++GKI++++ +++S+ ++++G + +++++++ E + +I+F+++++ ++++ ++++D+VK++ ++++G + ++G+ ", "computed_K_ungapped": "0.1362", "computed_lambda_ungapped": "1.0381", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5218", "entropy": 0.2556, "expected_score": -0.2344, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "5WQV_A Primosomal replication protein N; DNA binding protein, Bacterial DNA replication, OB-fold, S55A mutant; 1.97A {Escherichia coli (strain K12)} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 104, "target_eno": 12.0, "alignment": { "score": 31.03, "bit_score": 36.1, "evalue": 0.17, "pvalue": 0.15, "n_identities": 17, "n_positives": 49, "n_gaps": 15, "aln_length": 96, "query_from": 1, "query_to": 84, "target_from": 6, "target_to": 98, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeeee eeee eeeeeeeee ee eeeeeee eeee eeeee eeeeeeeeeeeee eeeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE------QY---PKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWN-GRWFNSIRAWRIE", "target_aln": "VLSGTVCRAPLRKV--SPSG-IPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVAGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIE", "middle": " ++G++ + ++++ S++G + +FVLE+++ ++ + ++ ++++G++ +++ I+VG++++V+ +I+ ++++ G++ ++++A +IE", "computed_K_ungapped": "0.1205", "computed_lambda_ungapped": "0.9836", "estimated_K_gapped": "0.0015", "estimated_lambda_gapped": "0.4944", "entropy": 0.1899, "expected_score": -0.1945, "min_score": -3, "max_score": 2 } }}, {"hit_record": { "target_description": "3STB_C RNA-editing complex protein MP42; RNA EDITING, Editosome, Nanobody, Single domain antibody, VHH, KREPA3, KREPA6, RNA BINDING PROTEIN-IMMUNE SYSTEM complex; 2.5A {Lama glama}", "query_length": 84, "query_eno": 7.0, "target_length": 148, "target_eno": 11.0, "alignment": { "score": 32.18, "bit_score": 36.0, "evalue": 0.17, "pvalue": 0.16, "n_identities": 10, "n_positives": 50, "n_gaps": 20, "aln_length": 95, "query_from": 1, "query_to": 80, "target_from": 48, "target_to": 137, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeee", "target_secstr": "eeeeeee eeeeeee eeeeeeeeee eeeeeee eeee eeeeeeeeee eeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-------QYPKKICFEFF-GDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRA", "target_aln": "VMLGVVQ--NIQEGFVF---EDKVLQFTLITDFEGPSPGDPDKDFHTVRVFDSDYSSRVKEQLRDGEWFLVTGRLRMVPQYDGSMRKYYHYPVIQ", "middle": " ++G+++ +++ ++ E K +F L T++ + ++++++++F +D ++++ +++G++++V+ ++++ +++ ++++++++", "computed_K_ungapped": "0.1298", "computed_lambda_ungapped": "1.1039", "estimated_K_gapped": "0.0017", "estimated_lambda_gapped": "0.5549", "entropy": 0.2341, "expected_score": -0.1992, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8GXH3|OSB2_ARATH Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 371, "target_eno": 5.0, "alignment": { "score": 33.10, "bit_score": 35.9, "evalue": 0.18, "pvalue": 0.17, "n_identities": 13, "n_positives": 52, "n_gaps": 13, "aln_length": 93, "query_from": 1, "query_to": 83, "target_from": 102, "target_to": 191, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee ee eee eeeeee eeeeeee hhhhhhh eeeeeeeeee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE---EQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "NLIGFVDQ--PVQFEASSDGKFWA-GTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNL", "middle": " ++G++ P+Q +S++G++ ++V+ ++ ++ + +I+++F+GD +++ ++++D+++VS++++++ +++ ++++++++ ++", "computed_K_ungapped": "0.1611", "computed_lambda_ungapped": "1.4381", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.7229", "entropy": 0.4343, "expected_score": -0.2675, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O31908|YORF_BACSU SPbeta prophage-derived uncharacterized protein YorF OS=Bacillus subtilis (strain 168) OX=224308 GN=yorF PE=4 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 304, "target_eno": 8.0, "alignment": { "score": 35.51, "bit_score": 35.8, "evalue": 0.21, "pvalue": 0.19, "n_identities": 12, "n_positives": 50, "n_gaps": 29, "aln_length": 97, "query_from": 1, "query_to": 73, "target_from": 16, "target_to": 107, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee eeeeeeee e", "target_secstr": "eeeeeeeeeeeee ee eeeeeeeee eeeeeeeeee eeee eeeeee eee eee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFG---DK--------------IDLL------NIQVGDEVKVS-FDIEGREWNGR", "target_aln": "TIEGTLAEVRHTE---WKNGNGLNIELDIEVAP--NEVHTVKGFSKYKKDDGTDNAVAKGYQTIVSEYKSIAKHGRDEADKVRITQGKISLNEYYSH", "middle": "+I+G+++++ ++ +KNG++++ E+++E+++ +++++++F+ ++ ++++ +++++D+V+++ +I+ +E++++", "computed_K_ungapped": "0.1511", "computed_lambda_ungapped": "0.9735", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.4893", "entropy": 0.2565, "expected_score": -0.2699, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 261, "target_eno": 7.0, "alignment": { "score": 32.68, "bit_score": 35.6, "evalue": 0.23, "pvalue": 0.21, "n_identities": 7, "n_positives": 62, "n_gaps": 16, "aln_length": 97, "query_from": 1, "query_to": 84, "target_from": 59, "target_to": 152, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee ", "target_secstr": "eeeeee eeeee e eeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeeeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE----EQYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG-------RWFNSIRAWRIE", "target_aln": "SLMGFVDRSIQVM--NTGPDR-FGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVN", "middle": "+++G++ + +++ ++++++ +++L ++ ++ + +I+++++++ ++++ + ++++D+++VS+++E++++++ ++ +++++ +++", "computed_K_ungapped": "0.1598", "computed_lambda_ungapped": "1.3600", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6837", "entropy": 0.4111, "expected_score": -0.2693, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O13988|POT1_SCHPO Protection of telomeres protein 1 OS=Schizosaccharomyces pombe (strain 972 \/ ATCC 24843) OX=284812 GN=pot1 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 555, "target_eno": 10.0, "alignment": { "score": 35.91, "bit_score": 35.5, "evalue": 0.25, "pvalue": 0.22, "n_identities": 12, "n_positives": 52, "n_gaps": 4, "aln_length": 76, "query_from": 1, "query_to": 73, "target_from": 44, "target_to": 118, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee ee eeeeeeee eeeeeee eeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-EQYPKKICFEFFGDKIDLL-NI-QVGDEVKVSFDIEGREWNGR", "target_aln": "NLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLH-QITLRSYRDR", "middle": " ++G++++++P+++ ++++++W+++ ++++ + ++ ++++++++F+++ ++L +I QVG+++ ++ +I+ R++++R", "computed_K_ungapped": "0.1610", "computed_lambda_ungapped": "1.2559", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6313", "entropy": 0.3572, "expected_score": -0.2744, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "1O7I_A SINGLE STRANDED DNA BINDING PROTEIN; SINGLE STRANDED DNA, OB FOLD, DNA-BINDING PROTEIN, DNA BINDING PROTEIN; HET: SO4; 1.2A {SULFOLOBUS SOLFATARICUS} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 119, "target_eno": 12.0, "alignment": { "score": 30.82, "bit_score": 35.4, "evalue": 0.27, "pvalue": 0.23, "n_identities": 12, "n_positives": 49, "n_gaps": 8, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 16, "target_to": 82, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee eeeeeeee e", "target_secstr": "eeeeeeee eeee eeeeeeee eeeeeeee eeeeee e", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVS-FDIEGREWNGR", "target_aln": "NVTVRVLEASEARQIQTKNGVRTISEAIVGDET---GRVKLTLWGKHAG--SIKEGQVVKIENAWTTA--FKGQ", "middle": " +T++++++++++++++KNG+ +++E++++ E+ ++++++++G++++ +I++G++VK++ + ++ ++G+", "computed_K_ungapped": "0.1270", "computed_lambda_ungapped": "1.0862", "estimated_K_gapped": "0.0016", "estimated_lambda_gapped": "0.5460", "entropy": 0.2094, "expected_score": -0.1938, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "3F1Z_B putative nucleic acid-binding lipoprotein; YP_001337197.1, putative nucleic acid-binding lipoprotein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative; HET: MSE, PEG; 2.46A {Klebsiella pneumoniae subsp. pneumoniae MGH 78578}", "query_length": 84, "query_eno": 7.0, "target_length": 133, "target_eno": 11.0, "alignment": { "score": 31.74, "bit_score": 35.3, "evalue": 0.28, "pvalue": 0.24, "n_identities": 8, "n_positives": 43, "n_gaps": 10, "aln_length": 72, "query_from": 1, "query_to": 68, "target_from": 53, "target_to": 118, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeee", "target_secstr": "eeeeeeeeee eeeeee eeeeeee eeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQY---PKKICFEFFGDKIDLL-NIQVGDEVKVSFDIEGR", "target_aln": "KVRGVIVDIRRKSGIAG------SYYFIVTMRDEQNKTDKRLTFNFGSHNSADVEALSNGSVATIVGQVHQV", "middle": "+++G+I++I++ +++ + F+++++++ K+++F+F +++ +++ ++++G+++++++ +++ ", "computed_K_ungapped": "0.1516", "computed_lambda_ungapped": "1.1102", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5581", "entropy": 0.2894, "expected_score": -0.2573, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9FHJ6|RFA1C_ARATH Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=3702 GN=RPA1C PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 853, "target_eno": 6.0, "alignment": { "score": 35.75, "bit_score": 35.3, "evalue": 0.29, "pvalue": 0.25, "n_identities": 14, "n_positives": 45, "n_gaps": 10, "aln_length": 81, "query_from": 1, "query_to": 73, "target_from": 434, "target_to": 512, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeee eeeeeee eeeeee eeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN--IQV-----GDEVKVSFDIEGREWNGR", "target_aln": "DVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSG--RSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGK", "middle": " ++G++++I+P++++++KN+ E +K++++L+ +++ ++++++++G+ +++++ +Q V + +++ +E+NG+", "computed_K_ungapped": "0.1437", "computed_lambda_ungapped": "1.3057", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6564", "entropy": 0.3357, "expected_score": -0.2344, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1C PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 951, "target_eno": 6.0, "alignment": { "score": 35.13, "bit_score": 34.9, "evalue": 0.37, "pvalue": 0.31, "n_identities": 13, "n_positives": 48, "n_gaps": 10, "aln_length": 82, "query_from": 1, "query_to": 74, "target_from": 444, "target_to": 523, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ee", "target_secstr": " eeeeeeee eeeeeee eeeeeee eee eeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN--IQ-----VGDEVKVSFDIEGREWNGRW", "target_aln": "DLLGVVTSVSPSATIMRKIGTETRKRSIQLKDLSG--RSIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKS", "middle": "+++G++++++P++++++K+G E +K++++L+ +++ ++I+++++G+ +D ++ +Q + + + +++ +++NG++", "computed_K_ungapped": "0.1410", "computed_lambda_ungapped": "1.3541", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6807", "entropy": 0.3334, "expected_score": -0.2231, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q6NSI4|RADX_HUMAN RPA-related protein RADX OS=Homo sapiens OX=9606 GN=RADX PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 855, "target_eno": 6.0, "alignment": { "score": 35.29, "bit_score": 34.8, "evalue": 0.39, "pvalue": 0.32, "n_identities": 8, "n_positives": 55, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 72, "target_from": 376, "target_to": 450, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeeeeeee eeeeee eeeeee eeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG---EWKKQEFVLETEEQYPKKICFEFFGD-KIDLL-NIQVGDEVKVSFDIEGREWNG", "target_aln": "DVIGLLVFVGRVQRSKKKENREDFWSYRWIHIAD-GTSEQPFIVELFSTSQPEIFENIYPMAYFVC-TQLKVVRNDN", "middle": " ++G++++++++Q++++K++ W++++++++ ++ ++++++E+F++ ++++ NI++++++++ +++ +++++", "computed_K_ungapped": "0.1511", "computed_lambda_ungapped": "1.2749", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6409", "entropy": 0.3503, "expected_score": -0.2516, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P22336|RFA1_YEAST Replication factor A protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 \/ S288c) OX=559292 GN=RFA1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 621, "target_eno": 10.0, "alignment": { "score": 35.57, "bit_score": 34.7, "evalue": 0.42, "pvalue": 0.34, "n_identities": 11, "n_positives": 54, "n_gaps": 4, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 318, "target_to": 388, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee eeeee eeeeeee ee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVLGIIQTINPHFELTSRAGKKFDRRDITIVDDS--GFSISVGLWNQQALDFNLPEGSVAAI-KGVRVTDFGGK", "middle": "+++G+I++I+P++++TS++G ++++++++++ ++ ++I++++++++++++N+++G+++ + +++ ++++G+", "computed_K_ungapped": "0.1412", "computed_lambda_ungapped": "1.2337", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6202", "entropy": 0.2627, "expected_score": -0.2062, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8GWJ4|OSB3_ARATH Protein OSB3, chloroplastic\/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 440, "target_eno": 5.0, "alignment": { "score": 32.30, "bit_score": 34.6, "evalue": 0.46, "pvalue": 0.37, "n_identities": 13, "n_positives": 52, "n_gaps": 11, "aln_length": 92, "query_from": 1, "query_to": 83, "target_from": 85, "target_to": 174, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeeeee", "target_secstr": "eeeeeee eeeeeeeee eeeeeee hhhhhhhh eeeeeeeeee eeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLET-EEQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG-----RWFNSIRAWRI", "target_aln": "NLIGFVE--QPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL", "middle": " ++G+++ P+Q G++++G W + +++++ +++ ++ I+++F+GD ++ + ++++D+++VS +++++ +++ ++ +++++ ++", "computed_K_ungapped": "0.1614", "computed_lambda_ungapped": "1.4359", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.7218", "entropy": 0.4379, "expected_score": -0.2676, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "1XJV_A Protection of telomeres 1; telomere protein-DNA complex single-stranded DNA, TRANSCRIPTION-DNA COMPLEX; 1.73A {Homo sapiens} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 294, "target_eno": 11.0, "alignment": { "score": 33.79, "bit_score": 34.6, "evalue": 0.48, "pvalue": 0.38, "n_identities": 10, "n_positives": 50, "n_gaps": 8, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 19, "target_to": 87, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeeee eeeeeeee eeeeeeee eeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL-NI-QVGDEVKVSFDIEGREWNGR", "target_aln": "NVYGVVKFFKPPYLS--KGTD-YCSVVTIVDQTNV--KLTCLLFSGNYEALPIIYKNGDIVRFH-RLKIQVYKKE", "middle": " ++G++++++P+++ K+++ ++++++ ++ + K+++++F++++++L +I ++GD+V+++ +++ ++++++", "computed_K_ungapped": "0.1494", "computed_lambda_ungapped": "1.1511", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.5786", "entropy": 0.2822, "expected_score": -0.2448, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|F4JSG3|RFA1E_ARATH Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=3702 GN=RPA1E PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 784, "target_eno": 7.0, "alignment": { "score": 35.48, "bit_score": 34.2, "evalue": 0.6, "pvalue": 0.45, "n_identities": 16, "n_positives": 43, "n_gaps": 10, "aln_length": 82, "query_from": 1, "query_to": 74, "target_from": 364, "target_to": 443, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ee", "target_secstr": "eeeeeeee eee eeeeeee eee e", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN--IQ-----VGDEVKVSFDIEGREWNGRW", "target_aln": "DVIGIVSSISPTVTITRKNGTATPKRSLQLKDMS--GRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKT", "middle": " ++G++++I+P++++T+KNG + +K++++L ++ ++++++++GD++++++ +Q V + +++ +E+NG++", "computed_K_ungapped": "0.1454", "computed_lambda_ungapped": "1.2825", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6447", "entropy": 0.3171, "expected_score": -0.2295, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|D8UYN9|RFA1_TETTS Replication protein A 70 kDa DNA-binding subunit OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=RPA1 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 671, "target_eno": 7.0, "alignment": { "score": 35.60, "bit_score": 34.2, "evalue": 0.61, "pvalue": 0.46, "n_identities": 10, "n_positives": 51, "n_gaps": 5, "aln_length": 76, "query_from": 1, "query_to": 74, "target_from": 359, "target_to": 431, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ee", "target_secstr": "eeeeeeee hhhhh eeeee eeeeeee e eeeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSK-NG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGRW", "target_aln": "DLIVVVKADTEVKTMILKKDNQQQSKRDIISFDESL--IETEITLWGETAKDYDAKQGDI-IVFKDAKIGEFKDKK", "middle": " + ++++A+++++++++K ++ + +K+++++ E++ ++++++++G++++++++++GD+ V D++ +E++++ ", "computed_K_ungapped": "0.1502", "computed_lambda_ungapped": "1.2086", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6076", "entropy": 0.2960, "expected_score": -0.2344, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8C779|RADX_MOUSE RPA-related protein RADX OS=Mus musculus OX=10090 GN=Radx PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 850, "target_eno": 6.0, "alignment": { "score": 34.52, "bit_score": 34.2, "evalue": 0.62, "pvalue": 0.46, "n_identities": 8, "n_positives": 53, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 72, "target_from": 376, "target_to": 450, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": " eeeeeee eeeeeeee eeeeeee eeee eeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG---EWKKQEFVLETEEQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNG", "target_aln": "DVIGLLSFVGRVQRSKKKENSEDFWSYRWIHITD-GTSEQPFIVQLFSTSQPEVFENIYPMTYFV-CTQLKVVRNNS", "middle": " + G++++++++Q++++K++ W++++++++ ++ ++++++++F++ ++++ NI+++++++ +++ +++N+", "computed_K_ungapped": "0.1503", "computed_lambda_ungapped": "1.2663", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6366", "entropy": 0.3467, "expected_score": -0.2507, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q5FVP2|SOSB2_RAT SOSS complex subunit B2 OS=Rattus norvegicus OX=10116 GN=Nabp1 PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 198, "target_eno": 9.0, "alignment": { "score": 31.84, "bit_score": 33.9, "evalue": 0.73, "pvalue": 0.52, "n_identities": 10, "n_positives": 51, "n_gaps": 11, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 22, "target_to": 85, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee eeeeeeee e", "target_secstr": "eeeeeeeee eeeeeee eeeeeee eeeeeeeeee eee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVS-FDIEGREWNGR", "target_aln": "NVVFIVLEIGRVT--KTKDGH-EVRSCKVADRT---GSITISVWDEIGG--LIQTGDIIRLTRGYAS--MWKGC", "middle": "++++++++I++++ ++K+G+ ++++++++ ++ ++I++++++++++ +IQ+GD+++++ + ++ +W+G+", "computed_K_ungapped": "0.1383", "computed_lambda_ungapped": "1.0958", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.5508", "entropy": 0.2415, "expected_score": -0.2125, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9FME0|RFA1D_ARATH Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana OX=3702 GN=RPA1D PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 629, "target_eno": 9.0, "alignment": { "score": 34.00, "bit_score": 33.9, "evalue": 0.77, "pvalue": 0.54, "n_identities": 10, "n_positives": 53, "n_gaps": 9, "aln_length": 80, "query_from": 1, "query_to": 73, "target_from": 318, "target_to": 395, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee eeeeee eeeeeee eeeeee ", "query_aln": "EITGKIIAILPEQSGTSK-NG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN--I---QVGDEVKVSFDIEGREWNGR", "target_aln": "DLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADES--RKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGV", "middle": "+++G++++++P++S++++ ++ +++K++++L+ E+ K++++++++D++++++ + +++V + +++ ++++G+", "computed_K_ungapped": "0.1435", "computed_lambda_ungapped": "1.2829", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6449", "entropy": 0.2883, "expected_score": -0.2150, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q84J78|SSBP_ARATH Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 201, "target_eno": 8.0, "alignment": { "score": 30.72, "bit_score": 33.8, "evalue": 0.79, "pvalue": 0.55, "n_identities": 15, "n_positives": 45, "n_gaps": 25, "aln_length": 103, "query_from": 1, "query_to": 81, "target_from": 75, "target_to": 174, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee eeeeeeeee", "target_secstr": "eeeeee eee eeeeeeeee eeeeeee hhhhh eeeeeeeee ee eeeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE-------------QYPKKICFEFFGD-KIDLL--NIQVGDEVKVSFDIEGREWNG------RWFNSIRAW", "target_aln": "IICGKVGQA--PLQKILRNG-RTVTIFTVGTGGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVR", "middle": "+I+GK+ + +++ ++NG ++++F++ T++ + ++ ++++++++ + + ++ +++V V+ DIE R++N+ ++ ++I++ ", "computed_K_ungapped": "0.1380", "computed_lambda_ungapped": "1.2195", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6130", "entropy": 0.2897, "expected_score": -0.2212, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9FYJ2|OSB4_ARATH Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 360, "target_eno": 6.0, "alignment": { "score": 30.98, "bit_score": 33.2, "evalue": 1.2, "pvalue": 0.7, "n_identities": 14, "n_positives": 44, "n_gaps": 15, "aln_length": 83, "query_from": 1, "query_to": 71, "target_from": 76, "target_to": 155, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeee eeeeeeeee eeeeeee hhhhhhh eeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQ----------YPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWN", "target_aln": "DLIGYVHQ--PVQFDSTLDGK-FWAGTVISHEPSSDSKSESDSSSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQ", "middle": " ++G++++ P+Q ++++G+ ++V+++E++ +++I+++F+GD +++ + ++++D+V+++++I+G+ ++", "computed_K_ungapped": "0.1520", "computed_lambda_ungapped": "1.3290", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6680", "entropy": 0.3750, "expected_score": -0.2570, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q92372|RFA1_SCHPO Replication factor A protein 1 OS=Schizosaccharomyces pombe (strain 972 \/ ATCC 24843) OX=284812 GN=ssb1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 609, "target_eno": 10.0, "alignment": { "score": 33.06, "bit_score": 33.1, "evalue": 1.3, "pvalue": 0.73, "n_identities": 10, "n_positives": 51, "n_gaps": 5, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 313, "target_to": 384, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeee eeeeeee eeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG--EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVIGVLQNVGPVQQITSRATSRGFDKRDITIVD--QTGYEMRVTLWGKTAIEFSVSEE-SILAFKGVKVNDFQGR", "middle": " + G++++++P+Q++TS+++ +++K++++++ Q ++++++++G+++++++++++ ++ + +++ ++++GR", "computed_K_ungapped": "0.1404", "computed_lambda_ungapped": "1.2620", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6344", "entropy": 0.2884, "expected_score": -0.2174, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9CDT7|DPO3_LACLA DNA polymerase III PolC-type OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=polC PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 1638, "target_eno": 4.0, "alignment": { "score": 33.08, "bit_score": 33.0, "evalue": 1.4, "pvalue": 0.75, "n_identities": 7, "n_positives": 34, "n_gaps": 6, "aln_length": 49, "query_from": 1, "query_to": 47, "target_from": 250, "target_to": 294, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee ", "target_secstr": "eeeeeee eeeeeeeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKN-G-EWKKQEFVLETEEQYPKKICFEFFGDK", "target_aln": "IFEGLVFEA-AHREFTGKESGKVNHILELKMA---DETSTFMISKWGRK", "middle": " ++G+++++ +++++T+K+ G + +++E++++ +++++++++++G+K", "computed_K_ungapped": "0.1871", "computed_lambda_ungapped": "1.5654", "estimated_K_gapped": "0.0024", "estimated_lambda_gapped": "0.7869", "entropy": 0.4694, "expected_score": -0.2800, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9SKI4|RFA1A_ARATH Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 640, "target_eno": 9.0, "alignment": { "score": 32.97, "bit_score": 33.0, "evalue": 1.4, "pvalue": 0.76, "n_identities": 11, "n_positives": 55, "n_gaps": 12, "aln_length": 82, "query_from": 1, "query_to": 73, "target_from": 333, "target_to": 411, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee eeeeeee eeeeee e eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL--------NIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVIGVVTSVNPSVPILRKNGMETHRRILNLKDESG--KAVEVTLWGEFCNRDGRQLEEMVDSAFHPVL-AIKAGKVSDFSGK", "middle": "+++G++++++P++++++KNG E+++++++L+ E++ K+++++++G++++++ ++++++++ + +++ ++++G+", "computed_K_ungapped": "0.1440", "computed_lambda_ungapped": "1.2649", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6358", "entropy": 0.2827, "expected_score": -0.2160, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "1K8G_C Telomere-Binding Protein alpha Subunit; Protein-DNA Complex, telomeres, sequence specific ssDNA binding protein, OB folds, protein single strand DNA interactions, 3'-DNA; HET: SO4; 2.6A {Sterkiella nova} SCOP: b.40.4.3", "query_length": 84, "query_eno": 7.0, "target_length": 320, "target_eno": 11.0, "alignment": { "score": 32.19, "bit_score": 32.8, "evalue": 1.6, "pvalue": 0.79, "n_identities": 9, "n_positives": 51, "n_gaps": 14, "aln_length": 84, "query_from": 1, "query_to": 73, "target_from": 53, "target_to": 133, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee eeeeeeee eeeeeee eeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE---------QYPKKICFEFFGDKIDLL-NI-QVGDEVKVSFDIEGREWNGR", "target_aln": "HFYAVVIDATFPYKT--NQERYICSLKIVDPTLYLKQQKGAGDASDYATLVLYAKRFEDLPIIHRAGDIIRVH-RATLRLYNGQ", "middle": " + +++I+++++++ ++++++ + ++++ + ++++ +++++++++ ++L +I ++GD+++V+ +++ R++NG+", "computed_K_ungapped": "0.1548", "computed_lambda_ungapped": "1.2334", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6200", "entropy": 0.3264, "expected_score": -0.2608, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q4R8G6|MEIOB_MACFA Meiosis-specific with OB domain-containing protein OS=Macaca fascicularis OX=9541 GN=MEIOB PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 471, "target_eno": 11.0, "alignment": { "score": 32.38, "bit_score": 32.8, "evalue": 1.6, "pvalue": 0.8, "n_identities": 8, "n_positives": 55, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 72, "target_from": 169, "target_to": 243, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeee ee ", "target_secstr": "eeeeeeee eeeee eeeeeeee eeeeeeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGR--EWNG", "target_aln": "NVLAAVKSVGEPKYFTTSDRRKGQRCEVRLYDETE--FSFAMTCWDNESILLAQSWMPRETVIFVSDVRISFDKFRN", "middle": " ++++++++++++++T++++ +++++E++L+ E+ +++++++++++++LL +++++++V + D++ + ++++", "computed_K_ungapped": "0.1397", "computed_lambda_ungapped": "1.2710", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6389", "entropy": 0.2658, "expected_score": -0.2042, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q6YZ49|RFA1A_ORYSJ Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 656, "target_eno": 9.0, "alignment": { "score": 32.88, "bit_score": 32.6, "evalue": 1.9, "pvalue": 0.85, "n_identities": 15, "n_positives": 46, "n_gaps": 10, "aln_length": 81, "query_from": 1, "query_to": 73, "target_from": 347, "target_to": 425, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeee eeeeee eeeeee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN--IQV----G-DEVKVSFDIEGREWNGR", "target_aln": "DIIGVVTSVNPCTTIQRKNGMETQKRTMNLKDMSG--RSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGK", "middle": "+I+G++++++P++++++KNG E +K++++L+ +++ ++++++++GD +++++ +Q G V + +++ ++++G+", "computed_K_ungapped": "0.1409", "computed_lambda_ungapped": "1.2209", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6137", "entropy": 0.2812, "expected_score": -0.2209, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q56Y52|POT1A_ARATH Protection of telomeres protein 1a OS=Arabidopsis thaliana OX=3702 GN=POT1A PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 467, "target_eno": 10.0, "alignment": { "score": 32.43, "bit_score": 32.5, "evalue": 2, "pvalue": 0.86, "n_identities": 8, "n_positives": 51, "n_gaps": 6, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 25, "target_to": 95, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee eeeeeee eeeeee eeeee e eee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL-NI-QVGDEVKVSFDIEGREWNGR", "target_aln": "SLIGIVLEQREPKQ--CRNNDWICTLRIIDDTYP-SPGLTVNVFSKTLEQLPQIKNHDDMILFT-RIKMQTFDSG", "middle": " + G++++++++++ ++N++W+ + ++++ + + ++ +++++F+++ ++L +I +++D++ ++ +I+ ++++++", "computed_K_ungapped": "0.1522", "computed_lambda_ungapped": "1.2354", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6210", "entropy": 0.3263, "expected_score": -0.2548, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q8VEE4|RFA1_MOUSE Replication protein A 70 kDa DNA-binding subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 623, "target_eno": 9.0, "alignment": { "score": 32.57, "bit_score": 32.3, "evalue": 2.2, "pvalue": 0.89, "n_identities": 13, "n_positives": 48, "n_gaps": 6, "aln_length": 74, "query_from": 1, "query_to": 72, "target_from": 207, "target_to": 276, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeeeeee eeeeeeee eeeeeee eeeeee e eee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNG", "target_aln": "TICARVTNKSQIRTWSNSRGEGKLFSLELVDES---GEIRATAFNEQVDKFFPLIEVNKVYYFS-KGALKIANK", "middle": "+I+++++++++++++++++GE K ++++L E+ ++I++++F++++D++ + I+V++++++S + + ++ N+", "computed_K_ungapped": "0.1484", "computed_lambda_ungapped": "1.2284", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6175", "entropy": 0.2931, "expected_score": -0.2297, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q19537|RFA1_CAEEL Probable replication factor A 73 kDa subunit OS=Caenorhabditis elegans OX=6239 GN=rpa-1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 655, "target_eno": 8.0, "alignment": { "score": 33.32, "bit_score": 32.3, "evalue": 2.2, "pvalue": 0.89, "n_identities": 14, "n_positives": 48, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 73, "target_from": 355, "target_to": 428, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee eeeeeee eeeeeee eee eeeeee ", "query_aln": "EITGKIIAIL-PEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVLVVVEKMDPEATEFTSKAGKSLIKREMELI--DESGALVRLTLWGDEATKALVDDYVQKVI-AFKGVIPREFNGG", "middle": " +++++++++ +++++TSK+G +++K+E++L ++ ++++++++GD+++++ + +V++++ + +++ RE+NG+", "computed_K_ungapped": "0.1436", "computed_lambda_ungapped": "1.2086", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6075", "entropy": 0.2833, "expected_score": -0.2238, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q5ZJJ2|RFA1_CHICK Replication protein A 70 kDa DNA-binding subunit OS=Gallus gallus OX=9031 GN=RPA1 PE=2 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 614, "target_eno": 9.0, "alignment": { "score": 31.94, "bit_score": 32.2, "evalue": 2.5, "pvalue": 0.92, "n_identities": 10, "n_positives": 55, "n_gaps": 5, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 315, "target_to": 386, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee eee eeeeeeee eeeeeee e eeee ", "query_aln": "EITGKIIAILPEQSGTSK--NGEWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSG--KLVTATLWGNEAEKFDGSRQPV-IAIKGARVSDFGGR", "middle": "+++G+++++++++++++K N+E++K++++L+ +++ K+++++++G+++++++++++++ + +++ ++++GR", "computed_K_ungapped": "0.1459", "computed_lambda_ungapped": "1.2520", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6294", "entropy": 0.2866, "expected_score": -0.2202, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q9W3M9|HDM_DROME Protein hold'em OS=Drosophila melanogaster OX=7227 GN=hdm PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 486, "target_eno": 11.0, "alignment": { "score": 31.64, "bit_score": 32.0, "evalue": 2.7, "pvalue": 0.94, "n_identities": 9, "n_positives": 46, "n_gaps": 8, "aln_length": 68, "query_from": 1, "query_to": 62, "target_from": 21, "target_to": 86, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee", "target_secstr": "eeeeeeeee eeeeeee eeeeeee hhhhhh eeeeee", "query_aln": "EITGKIIAILPEQSGTSK-NG-EWKKQEFVLETEEQYPKKICFEFFGD--KIDLL--NIQVGDEVKVS", "target_aln": "STVALIVSKSSPNIFYDKMSGTERGVLSLTIRDSP--NHLTNCKCWGQRDCVDEYAAMLQIGHVVDIV", "middle": " ++++I+++++++++++K +G E ++++++++ ++ ++++++++G+ +D++ ++Q+G++V+++", "computed_K_ungapped": "0.1496", "computed_lambda_ungapped": "1.3061", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6566", "entropy": 0.2956, "expected_score": -0.2186, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "7CUH_A Protection of telomeres protein 1; telomere, protein-ssDNA complex, DNA BINDING PROTEIN; 3.0A {Schizosaccharomyces pombe (strain 972 \/ ATCC 24843)}", "query_length": 84, "query_eno": 7.0, "target_length": 339, "target_eno": 11.0, "alignment": { "score": 31.42, "bit_score": 32.0, "evalue": 2.7, "pvalue": 0.94, "n_identities": 13, "n_positives": 47, "n_gaps": 6, "aln_length": 77, "query_from": 1, "query_to": 73, "target_from": 44, "target_to": 118, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee eee eeeee eeeeeee eeeee e ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEE--QYPKKICFEFFGDKIDLL-NI-QVGDEVKVSFDIEGREWNGR", "target_aln": "NLFGIVKDFTPSRQSLHGTKDWVT-TVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLH-QITLRSYRDR", "middle": " + G++++++P+++ +++++W++ +++L ++ + ++ +++++F+++ ++L +I QVG+++ ++ +I+ R++++R", "computed_K_ungapped": "0.1551", "computed_lambda_ungapped": "1.2252", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6159", "entropy": 0.3371, "expected_score": -0.2671, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P62597|POTE1_CHICK Protection of telomeres protein 1 OS=Gallus gallus OX=9031 GN=POT1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 778, "target_eno": 8.0, "alignment": { "score": 32.84, "bit_score": 32.0, "evalue": 2.8, "pvalue": 0.94, "n_identities": 11, "n_positives": 44, "n_gaps": 6, "aln_length": 65, "query_from": 1, "query_to": 62, "target_from": 39, "target_to": 100, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee", "target_secstr": "eeeeeeeee ee eeeee eeeeeee hhhhh eeeee", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETE-EQYPKKICFEFFGDKIDLL--NIQVGDEVKVS", "target_aln": "YFQGIVILSYPLTKLGD-GTDFF--KIVLQDDTCSRINSINVLMYGKMAEDCAKLIRNGDTFIVA", "middle": " ++G++I+++P++++++ +++++ ++VL+ + ++ +++I+++++G+ ++++ +I++GD+++V+", "computed_K_ungapped": "0.1521", "computed_lambda_ungapped": "1.2583", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6325", "entropy": 0.3074, "expected_score": -0.2372, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q10Q08|RFA1B_ORYSJ Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1B PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 630, "target_eno": 9.0, "alignment": { "score": 31.68, "bit_score": 31.9, "evalue": 3, "pvalue": 0.95, "n_identities": 9, "n_positives": 51, "n_gaps": 9, "aln_length": 79, "query_from": 1, "query_to": 72, "target_from": 322, "target_to": 398, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": " eeeeeeee eeeeee eeeeeee hhhhh ", "query_aln": "EITGKIIAILPEQSGTSKN-G-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLN-----IQVGDEVKVSFDIEGREWNG", "target_aln": "DVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS--SKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQG", "middle": " ++G++++++P++S+++K+ + +++K+++V++ ++ K++++++++D++++++ +++ + + +++ ++++G", "computed_K_ungapped": "0.1442", "computed_lambda_ungapped": "1.2747", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6408", "entropy": 0.2945, "expected_score": -0.2210, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|O97472|RFA1_CAEBR Probable replication factor A 73 kDa subunit OS=Caenorhabditis briggsae OX=6238 GN=rpa-1 PE=3 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 658, "target_eno": 9.0, "alignment": { "score": 31.57, "bit_score": 31.5, "evalue": 4, "pvalue": 0.98, "n_identities": 14, "n_positives": 50, "n_gaps": 7, "aln_length": 77, "query_from": 1, "query_to": 73, "target_from": 355, "target_to": 428, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee hhhhhh eeeeee hhhh ee eee ", "query_aln": "EITGKIIAIL-PEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLL--NIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVLVIVEKMDAEATEFTSKAGKTLTKREMELI--DESQALVRLTLWGDEAIKANVDDYHGKVI-AFKGVIPREFNGG", "middle": " +++++++++ +++++TSK+G +++K+E++L +++ ++++++++GD+++++ ++++G+++ + +++ RE+NG+", "computed_K_ungapped": "0.1468", "computed_lambda_ungapped": "1.2466", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6267", "entropy": 0.2999, "expected_score": -0.2296, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q23696|RFA1_CRIFA Replication factor A 51 kDa subunit OS=Crithidia fasciculata OX=5656 GN=RPA1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 467, "target_eno": 11.0, "alignment": { "score": 30.38, "bit_score": 31.0, "evalue": 5.5, "pvalue": 1, "n_identities": 14, "n_positives": 46, "n_gaps": 6, "aln_length": 74, "query_from": 1, "query_to": 72, "target_from": 147, "target_to": 216, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": "eeeeeeeee eeeeeeee hhhhhh eeee ee ee ", "query_aln": "EITGKIIAILPEQSGTSK-NG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNG", "target_aln": "DVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMSA---AVEVTFWNDEAKAWNYPVGTVVA-LRQLKVGSFDG", "middle": " ++G+++++++++S+T+K +G E++K++++++ ++ ++++F++D+++++N++VG++V +++ ++++G", "computed_K_ungapped": "0.1448", "computed_lambda_ungapped": "1.3040", "estimated_K_gapped": "0.0019", "estimated_lambda_gapped": "0.6555", "entropy": 0.2762, "expected_score": -0.2051, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q6NY74|RFA1_DANRE Replication protein A 70 kDa DNA-binding subunit OS=Danio rerio OX=7955 GN=rpa1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 601, "target_eno": 10.0, "alignment": { "score": 30.83, "bit_score": 30.9, "evalue": 5.8, "pvalue": 1, "n_identities": 10, "n_positives": 54, "n_gaps": 4, "aln_length": 74, "query_from": 1, "query_to": 73, "target_from": 305, "target_to": 375, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeee eeeeeee eeeeeee ee eeeeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNGR", "target_aln": "DVIGVCKNAEDVARIMTKNSREVSKRNIQLIDMSG--RVIQLTMWGSDAETFDGSGQPIL-AIKGARLSDFGGR", "middle": "++ G+++++++++++++KN+ E +K++++L+ +++ ++I+++++G++++++++++++++ + +++ ++++GR", "computed_K_ungapped": "0.1413", "computed_lambda_ungapped": "1.2485", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6276", "entropy": 0.2726, "expected_score": -0.2102, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "7QXS_P Protection of telomeres protein 1; Reverse transcriptase, ribonucleoprotein, telomerase, telomere, DNA BINDING PROTEIN, RNA BINDING PROTEIN; 3.91A {Homo sapiens}", "query_length": 84, "query_eno": 7.0, "target_length": 634, "target_eno": 10.0, "alignment": { "score": 31.65, "bit_score": 30.8, "evalue": 6.4, "pvalue": 1, "n_identities": 9, "n_positives": 50, "n_gaps": 8, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 24, "target_to": 92, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": " eeeeeeee eeeeeeee eeeeee eeeee eeeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNGR", "target_aln": "NVYGVVKFFKPPYLS--KGTD-YCSVVTIVDQTNV--KLTCLLFSGNYEALPIIYKNGDIVRFH-RLKIQVYKKE", "middle": " ++G++++++P+++ K+++ ++++++ ++ K+++++F++++++L + +++GD+V+++ +++ ++++++", "computed_K_ungapped": "0.1588", "computed_lambda_ungapped": "1.2457", "estimated_K_gapped": "0.0020", "estimated_lambda_gapped": "0.6262", "entropy": 0.3196, "expected_score": -0.2536, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q91WC1|POTE1_MOUSE Protection of telomeres protein 1 OS=Mus musculus OX=10090 GN=Pot1 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 640, "target_eno": 9.0, "alignment": { "score": 30.94, "bit_score": 30.5, "evalue": 7.9, "pvalue": 1, "n_identities": 11, "n_positives": 51, "n_gaps": 8, "aln_length": 75, "query_from": 1, "query_to": 73, "target_from": 24, "target_to": 92, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee e", "target_secstr": "eeeeeeee ee eeeeee eeeeeeee ee eeeee eeeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL-N-IQVGDEVKVSFDIEGREWNGR", "target_aln": "NVYGVVKFFKPPYV--SKGTDYC-SVVTIVDQTN--VKLTCMLFSGNYEALPIIYKVGDIVRFH-RLKIQVYKNE", "middle": " ++G++++++P+++ SK+++++ +++++ ++ +K+++++F++++++L + ++VGD+V+++ +++ ++++++", "computed_K_ungapped": "0.1640", "computed_lambda_ungapped": "1.2781", "estimated_K_gapped": "0.0021", "estimated_lambda_gapped": "0.6425", "entropy": 0.3302, "expected_score": -0.2553, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|P27694|RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit OS=Homo sapiens OX=9606 GN=RPA1 PE=1 SV=2", "query_length": 84, "query_eno": 7.0, "target_length": 616, "target_eno": 10.0, "alignment": { "score": 30.79, "bit_score": 30.5, "evalue": 7.9, "pvalue": 1, "n_identities": 12, "n_positives": 39, "n_gaps": 5, "aln_length": 64, "query_from": 1, "query_to": 62, "target_from": 198, "target_to": 258, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeee", "target_secstr": "eeeeeeeee eeeeeee eeeeee eeeee ", "query_aln": "EITGKIIAILPEQSGTSKNGEWKKQEFVLETEEQYPKKICFEFFGDKIDLL--NIQVGDEVKVS", "target_aln": "TICARVTNKSQIRTWSNSRGEGKLFSLELVDESG---EIRATAFNEQVDKFFPLIEVNKVYYFS", "middle": " I+++++++++++++++++GE K ++++L E+ +I++++F++ +D++ I+V++++++S", "computed_K_ungapped": "0.1422", "computed_lambda_ungapped": "1.2564", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6316", "entropy": 0.2812, "expected_score": -0.2146, "min_score": -3, "max_score": 3 } }}, {"hit_record": { "target_description": "sp|Q24492|RFA1_DROME Replication protein A 70 kDa DNA-binding subunit OS=Drosophila melanogaster OX=7227 GN=RpA-70 PE=1 SV=1", "query_length": 84, "query_eno": 7.0, "target_length": 603, "target_eno": 10.0, "alignment": { "score": 30.75, "bit_score": 30.2, "evalue": 9.6, "pvalue": 1, "n_identities": 15, "n_positives": 47, "n_gaps": 5, "aln_length": 74, "query_from": 1, "query_to": 72, "target_from": 302, "target_to": 372, "query_secstr_available": 1, "target_secstr_available": 1, "query_secstr": " eeeeeeeee eeee eeeeeeeeee eeeeeee eeeeeeeeeeeee ", "target_secstr": " eeeeeeee eeeeeeee eeeeeee eeee ee ", "query_aln": "EITGKIIAILPEQSGTSK-NG-EWKKQEFVLETEEQYPKKICFEFFGDKIDLLNIQVGDEVKVSFDIEGREWNG", "target_aln": "DTIGICKEVGELQSFVARTTNKEFKKRDITLVDMS--NSAISLTLWGDDAVNFDGHVQPVILV-KGTRINEFNG", "middle": " ++G++++++++QS++++ ++ E+KK++++L+ ++ ++I+++++GD++++++ +V++++ V +++ +E+NG", "computed_K_ungapped": "0.1424", "computed_lambda_ungapped": "1.2254", "estimated_K_gapped": "0.0018", "estimated_lambda_gapped": "0.6160", "entropy": 0.2672, "expected_score": -0.2112, "min_score": -3, "max_score": 3 } }} ], "search_statistics": { "reference_K_ungapped": 0.1158, "reference_lambda_ungapped": 1.1163, "reference_K_gapped": 0.0015, "reference_lambda_gapped": 0.5611, "query_length": 84, "database_size": 143238575, "effective_query_length": 84, "effective_database_size": 143238575, "effective_search_space": 12032039936 } }}